Variant report

Variant	rs35314147
Chromosome Location	chr8:125609103-125609104
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:125609071..125612556-chr8:125615058..125616813,3	K562	blood:
2	chr8:125603929..125607098-chr8:125608646..125611096,3	MCF-7	breast:
3	chr8:125607603..125609635-chr8:125611568..125614281,2	MCF-7	breast:
4	chr8:125581193..125583391-chr8:125607866..125609825,2	MCF-7	breast:
5	chr8:125607033..125612930-chr8:125826274..125829090,6	K562	blood:
6	chr8:125607877..125610696-chr8:125617418..125620245,2	K562	blood:

Variant related genes	Relation type
ENSG00000255491	Chromatin interaction

rs_ID	r²[population]
rs11994108	0.91[ASN][1000 genomes]
rs11994203	0.93[ASN][1000 genomes]
rs13251109	0.81[EUR][1000 genomes]
rs13258027	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs16899748	0.81[EUR][1000 genomes]
rs3857946	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4007921	0.81[EUR][1000 genomes]

Chromatin state (count:79 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:125574400-125609400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr8:125584400-125617200	Weak transcription	Colonic Mucosa	Colon
3	chr8:125596200-125616400	Weak transcription	HSMMtube	muscle
4	chr8:125596400-125609800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
5	chr8:125602000-125620400	Weak transcription	HMEC	breast
6	chr8:125603000-125616800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
7	chr8:125603400-125609200	Weak transcription	Fetal Intestine Large	intestine
8	chr8:125603400-125612000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr8:125603400-125612600	Weak transcription	NHLF	lung
10	chr8:125603400-125612800	Weak transcription	Gastric	stomach
11	chr8:125603400-125617000	Weak transcription	Rectal Mucosa Donor 29	rectum
12	chr8:125603400-125617400	Weak transcription	Esophagus	oesophagus
13	chr8:125603400-125625800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
14	chr8:125603600-125611800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
15	chr8:125603600-125612000	Weak transcription	Rectal Mucosa Donor 31	rectum
16	chr8:125605000-125609200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
17	chr8:125605000-125609200	Enhancers	Brain Germinal Matrix	brain
18	chr8:125605000-125609200	Enhancers	Brain Hippocampus Middle	brain
19	chr8:125605000-125609400	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
20	chr8:125605000-125609400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
21	chr8:125605000-125610200	Enhancers	Right Atrium	heart
22	chr8:125605000-125610800	Enhancers	Skeletal Muscle Female	skeletal muscle
23	chr8:125605000-125613800	Enhancers	Fetal Muscle Leg	muscle
24	chr8:125605000-125614200	Enhancers	Placenta	Placenta
25	chr8:125605000-125615800	Enhancers	Cortex derived primary cultured neurospheres	brain
26	chr8:125605200-125609400	Enhancers	Primary B cells from cord blood	blood
27	chr8:125605200-125609400	Enhancers	Primary B cells from peripheral blood	blood
28	chr8:125605400-125610000	Enhancers	Primary monocytes fromperipheralblood	blood
29	chr8:125605600-125609800	Enhancers	Adipose Nuclei	Adipose
30	chr8:125605800-125609600	Enhancers	Brain Anterior Caudate	brain
31	chr8:125605800-125609600	Enhancers	Brain Cingulate Gyrus	brain
32	chr8:125605800-125617000	Weak transcription	Pancreatic Islets	Pancreatic Islet
33	chr8:125606000-125612800	Weak transcription	HepG2	liver
34	chr8:125606000-125617200	Weak transcription	Colon Smooth Muscle	Colon
35	chr8:125606400-125617000	Weak transcription	Pancreas	Pancrea
36	chr8:125606600-125617400	Weak transcription	Sigmoid Colon	Sigmoid Colon
37	chr8:125607000-125609200	Enhancers	Primary T helper cells PMA-I stimulated	--
38	chr8:125607200-125612000	Weak transcription	Fetal Lung	lung
39	chr8:125607400-125609400	Enhancers	Brain Substantia Nigra	brain
40	chr8:125607400-125609600	Enhancers	Primary hematopoietic stem cells short term culture	blood
41	chr8:125607400-125610200	Enhancers	Skeletal Muscle Male	skeletal muscle
42	chr8:125607400-125610400	Weak transcription	NHDF-Ad	bronchial
43	chr8:125607400-125610600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
44	chr8:125607400-125611600	Enhancers	Fetal Muscle Trunk	muscle
45	chr8:125607400-125612800	Weak transcription	Stomach Smooth Muscle	stomach
46	chr8:125607400-125615600	Weak transcription	Small Intestine	intestine
47	chr8:125607400-125617000	Enhancers	Fetal Thymus	thymus
48	chr8:125607600-125609200	Weak transcription	Fetal Brain Female	brain
49	chr8:125607600-125609400	ZNF genes & repeats	Fetal Intestine Small	intestine
50	chr8:125607600-125609400	ZNF genes & repeats	Fetal Stomach	stomach

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