Variant report

Variant	rs35384112
Chromosome Location	chrY:5810174-5810175
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 33 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs10881780	0.82[AFR][1000 genomes]
rs11186104	0.89[ASN][1000 genomes]
rs11186105	0.89[ASN][1000 genomes]
rs11186109	0.82[AFR][1000 genomes]
rs11511339	0.83[ASN][1000 genomes]
rs12359902	0.83[ASN][1000 genomes]
rs12761749	0.80[AFR][1000 genomes];0.97[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12778542	0.84[AFR][1000 genomes];0.97[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12778920	0.84[AFR][1000 genomes];0.97[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12779981	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12784961	0.87[AFR][1000 genomes];0.97[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs1887183	0.84[AFR][1000 genomes];0.97[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs1887184	0.83[AFR][1000 genomes];0.97[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1887185	0.95[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1887186	0.95[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs35440289	0.94[ASN][1000 genomes]
rs35499322	0.88[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4994943	0.89[AMR][1000 genomes]
rs4994945	0.84[AFR][1000 genomes];0.95[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4994946	0.84[AFR][1000 genomes];0.95[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7087199	0.83[AFR][1000 genomes];0.94[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7896252	0.83[AFR][1000 genomes];0.97[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7901249	0.82[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7901360	0.82[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7901486	0.84[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7905038	0.81[AFR][1000 genomes];0.97[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7905612	0.94[ASN][1000 genomes]
rs7905702	0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7906009	0.83[ASN][1000 genomes]
rs7907215	0.83[AFR][1000 genomes];0.95[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7919251	0.83[AFR][1000 genomes];0.97[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7919262	0.83[AFR][1000 genomes];0.97[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7922885	0.83[AFR][1000 genomes];0.97[AMR][1000 genomes];0.90[EUR][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrY:5809000-5811000	Active TSS	iPS-20b Cell Line	embryonic stem cell
2	chrY:5809200-5811000	Active TSS	H1 Cell Line	embryonic stem cell
3	chrY:5809800-5811000	Active TSS	HUES64 Cell Line	embryonic stem cell
4	chrY:5810000-5811000	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
5	chrY:5810000-5812200	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell

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