Variant report

Variant rs35392872
Chromosome Location chr1:150547938-150547939
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150541400-150549200 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr1:150542200-150548000 Genic enhancers Placenta Placenta
3 chr1:150542600-150548200 Genic enhancers Cortex derived primary cultured neurospheres brain
4 chr1:150542800-150551600 Transcr. at gene 5' and 3' Primary T helper cells PMA-I stimulated --
5 chr1:150543000-150549200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr1:150543600-150548200 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr1:150543600-150552000 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
8 chr1:150543600-150552000 Transcr. at gene 5' and 3' Primary T regulatory cells fromperipheralblood blood
9 chr1:150543600-150552000 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
10 chr1:150544200-150551600 Transcr. at gene 5' and 3' Primary T helper naive cells from peripheral blood blood
11 chr1:150544600-150551600 Transcr. at gene 5' and 3' Primary T cells fromperipheralblood blood
12 chr1:150544800-150548400 Strong transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr1:150545000-150548600 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
14 chr1:150545000-150550000 Transcr. at gene 5' and 3' Primary T killer naive cells fromperipheralblood blood
15 chr1:150545000-150551400 Transcr. at gene 5' and 3' Monocytes-CD14+_RO01746 blood
16 chr1:150545200-150548400 Transcr. at gene 5' and 3' Primary T cells effector/memory enriched fromperipheralblood blood
17 chr1:150545200-150550200 Transcr. at gene 5' and 3' Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr1:150545200-150551000 Transcr. at gene 5' and 3' Breast Myoepithelial Primary Cells Breast
19 chr1:150545200-150551000 Transcr. at gene 5' and 3' Primary B cells from cord blood blood
20 chr1:150545200-150551400 Transcr. at gene 5' and 3' Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr1:150545200-150551400 Transcr. at gene 5' and 3' Primary T helper memory cells from peripheral blood 2 blood
22 chr1:150545200-150551600 Transcr. at gene 5' and 3' Primary T helper cells fromperipheralblood blood
23 chr1:150545200-150552000 Transcr. at gene 5' and 3' Primary T helper naive cells fromperipheralblood blood
24 chr1:150545400-150551000 Transcr. at gene 5' and 3' Primary neutrophils fromperipheralblood blood
25 chr1:150545400-150551000 Transcr. at gene 5' and 3' Duodenum Mucosa Duodenum
26 chr1:150545400-150551400 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr1:150545400-150551600 Transcr. at gene 5' and 3' Primary B cells from peripheral blood blood
28 chr1:150545400-150551600 Transcr. at gene 5' and 3' Primary T helper memory cells from peripheral blood 1 blood
29 chr1:150545600-150548000 Genic enhancers H1 Cell Line embryonic stem cell
30 chr1:150545600-150548000 Genic enhancers K562 blood
31 chr1:150545600-150548400 Genic enhancers Spleen Spleen
32 chr1:150545600-150549200 Genic enhancers Placenta Amnion Placenta Amnion
33 chr1:150545600-150550200 Transcr. at gene 5' and 3' Primary T cells from cord blood blood
34 chr1:150545600-150551400 Transcr. at gene 5' and 3' Adipose Nuclei Adipose
35 chr1:150545600-150551400 Transcr. at gene 5' and 3' Rectal Mucosa Donor 29 rectum
36 chr1:150546400-150548000 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr1:150546800-150548600 Transcr. at gene 5' and 3' GM12878-XiMat blood
38 chr1:150546800-150548800 Transcr. at gene 5' and 3' Fetal Muscle Leg muscle
39 chr1:150546800-150548800 Transcr. at gene 5' and 3' Psoas Muscle Psoas
40 chr1:150546800-150549000 Transcr. at gene 5' and 3' Stomach Smooth Muscle stomach
41 chr1:150546800-150550000 Transcr. at gene 5' and 3' Rectal Mucosa Donor 31 rectum
42 chr1:150546800-150550400 Transcr. at gene 5' and 3' Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr1:150546800-150550400 Transcr. at gene 5' and 3' HSMMtube muscle
44 chr1:150546800-150551000 Transcr. at gene 5' and 3' HMEC breast
45 chr1:150546800-150551000 Transcr. at gene 5' and 3' HUVEC blood vessel
46 chr1:150546800-150551200 Transcr. at gene 5' and 3' NH-A brain
47 chr1:150546800-150551400 Transcr. at gene 5' and 3' ES-I3 Cell Line embryonic stem cell
48 chr1:150546800-150551400 Transcr. at gene 5' and 3' hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr1:150546800-150551400 Transcr. at gene 5' and 3' Primary T killer memory cells from peripheral blood blood
50 chr1:150546800-150551400 Transcr. at gene 5' and 3' Duodenum Smooth Muscle Duodenum

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