Variant report

Variant	rs35433753
Chromosome Location	chr7:106886153-106886154
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs13234019	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3383027	chr7:106802625-107096474	Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
2	nsv888939	chr7:106849393-107045700	ZNF genes & repeats Strong transcription Weak transcription Enhancers Active TSS Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region miRNA target site	8 gene(s)	inside rSNPs	diseases
3	esv2756226	chr7:106850755-106944563	Weak transcription Strong transcription Enhancers ZNF genes & repeats Genic enhancers Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
4	nsv1016691	chr7:106880953-106960515	Weak transcription ZNF genes & repeats Strong transcription Enhancers Flanking Active TSS Genic enhancers Active TSS	TF binding region Chromatin interactive region	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:83 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:106844600-106888400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr7:106846000-106925800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
3	chr7:106850400-106890000	Weak transcription	Hela-S3	cervix
4	chr7:106850800-106895200	Weak transcription	Colon Smooth Muscle	Colon
5	chr7:106851000-106897600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
6	chr7:106851000-106946000	Weak transcription	Esophagus	oesophagus
7	chr7:106851200-106888200	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
8	chr7:106851200-106892400	Weak transcription	Gastric	stomach
9	chr7:106851200-106892600	Weak transcription	Rectal Smooth Muscle	rectum
10	chr7:106853400-106925600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
11	chr7:106863800-106887400	Weak transcription	Thymus	Thymus
12	chr7:106864000-106889600	Weak transcription	Spleen	Spleen
13	chr7:106865000-106887000	Weak transcription	Stomach Smooth Muscle	stomach
14	chr7:106865600-106888200	Weak transcription	Rectal Mucosa Donor 31	rectum
15	chr7:106865600-106890600	Weak transcription	Aorta	Aorta
16	chr7:106865600-106892400	Weak transcription	HepG2	liver
17	chr7:106866600-106909600	Weak transcription	Placenta	Placenta
18	chr7:106867000-106888000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
19	chr7:106867800-106889800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
20	chr7:106870800-106887600	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
21	chr7:106871600-106889800	Weak transcription	NHDF-Ad	bronchial
22	chr7:106872000-106889800	Weak transcription	Fetal Lung	lung
23	chr7:106874000-106888200	Weak transcription	Sigmoid Colon	Sigmoid Colon
24	chr7:106874000-106888200	Weak transcription	Skeletal Muscle Female	skeletal muscle
25	chr7:106874000-106890200	Weak transcription	GM12878-XiMat	blood
26	chr7:106874000-106917800	Weak transcription	Osteobl	bone
27	chr7:106874000-106922600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
28	chr7:106874000-106929200	Weak transcription	NH-A	brain
29	chr7:106874000-106945600	Weak transcription	Pancreas	Pancrea
30	chr7:106874800-106886400	Weak transcription	Rectal Mucosa Donor 29	rectum
31	chr7:106875000-106888200	Weak transcription	Brain Inferior Temporal Lobe	brain
32	chr7:106875000-106889200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
33	chr7:106875000-106890600	Weak transcription	H1 Cell Line	embryonic stem cell
34	chr7:106875400-106887000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
35	chr7:106875400-106908000	Weak transcription	HMEC	breast
36	chr7:106875600-106898400	Weak transcription	HUVEC	blood vessel
37	chr7:106876600-106890000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
38	chr7:106877200-106886400	Weak transcription	Fetal Intestine Large	intestine
39	chr7:106877600-106887200	Weak transcription	Primary T helper cells fromperipheralblood	blood
40	chr7:106877800-106888000	Weak transcription	HSMM	muscle
41	chr7:106878200-106888200	Weak transcription	Primary T helper cells PMA-I stimulated	--
42	chr7:106878800-106886400	Weak transcription	Duodenum Mucosa	Duodenum
43	chr7:106878800-106895000	Weak transcription	K562	blood
44	chr7:106879000-106887000	Weak transcription	Ovary	ovary
45	chr7:106879600-106887000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
46	chr7:106881200-106895600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
47	chr7:106882400-106890000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
48	chr7:106882600-106889200	Strong transcription	Monocytes-CD14+_RO01746	blood
49	chr7:106883000-106918800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
50	chr7:106883200-106887000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin

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