Variant report

Variant	esv2756226
Chromosome Location	chr7:106850755-106944563
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:453)
CpG islands
(count:123)
Chromatin interactive
region (count:74)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:453 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BATF	chr7:106873575-106873943	GM12878	blood:	n/a	n/a
2	BATF	chr7:106873571-106873887	GM12878	blood:	n/a	n/a
3	BCL11A	chr7:106873647-106873963	GM12878	blood:	n/a	n/a
4	BCL3	chr7:106914946-106915338	GM12878	blood:	n/a	n/a
5	BCL3	chr7:106914923-106915366	GM12878	blood:	n/a	n/a
6	BHLHE40	chr7:106926722-106926824	GM12878	blood:	n/a	n/a
7	BHLHE40	chr7:106864965-106864968	HepG2	liver:	n/a	n/a
8	BHLHE40	chr7:106853287-106853464	GM12878	blood:	n/a	n/a
9	BHLHE40	chr7:106871836-106871981	GM12878	blood:	n/a	n/a
10	BRCA1	chr7:106853407-106853413	GM12878	blood:	n/a	n/a
11	CBX3	chr7:106854407-106854767	K562	blood:	n/a	n/a
12	CEBPB	chr7:106874283-106874756	MCF-7	breast:	n/a	chr7:106874448-106874459
13	CEBPB	chr7:106860093-106860367	K562	blood:	n/a	chr7:106860200-106860211
14	CEBPB	chr7:106860027-106860380	IMR90	lung:	n/a	chr7:106860200-106860211
15	CEBPB	chr7:106917977-106918169	HepG2	liver:	n/a	chr7:106918089-106918100
16	CEBPB	chr7:106889503-106889539	HepG2	liver:	n/a	n/a
17	CEBPB	chr7:106875564-106875926	MCF-7	breast:	n/a	n/a
18	CEBPB	chr7:106860025-106860368	HepG2	liver:	n/a	chr7:106860200-106860211
19	CEBPB	chr7:106943938-106944027	HepG2	liver:	n/a	n/a
20	CEBPB	chr7:106860066-106860354	A549	lung:	n/a	chr7:106860200-106860211
21	CEBPB	chr7:106889371-106889575	A549	lung:	n/a	chr7:106889468-106889479
22	CEBPB	chr7:106875477-106875847	MCF-7	breast:	n/a	n/a
23	CHD2	chr7:106899151-106899168	HepG2	liver:	n/a	n/a
24	CTCF	chr7:106873740-106873890	GM12878	blood:	n/a	n/a
25	CTCF	chr7:106891503-106891534	GM13976	blood:	n/a	n/a
26	CTCF	chr7:106873728-106873991	H1-hESC	embryonic stem cell:	n/a	chr7:106873888-106873901 chr7:106873885-106873903 chr7:106873887-106873908
27	CTCF	chr7:106853700-106853850	HRPEpiC	eye:	n/a	n/a
28	CTCF	chr7:106853700-106853850	HFF-Myc	foreskin:	n/a	n/a
29	CTCF	chr7:106851019-106851102	Hela-S3	cervix:	n/a	n/a
30	CTCF	chr7:106853720-106853870	HBMEC	blood vessel:	n/a	n/a
31	CTCF	chr7:106853660-106853810	HCT-116	colon:	n/a	n/a
32	CTCF	chr7:106853780-106853930	HFF-Myc	foreskin:	n/a	n/a
33	CTCF	chr7:106853720-106853870	HCPEpiC	choroid plexus:	n/a	n/a
34	CTCF	chr7:106853773-106853870	GM12892	blood:	n/a	n/a
35	CTCF	chr7:106853720-106853870	GM12873	blood:	n/a	n/a
36	CTCF	chr7:106850980-106851130	Caco-2	colon:	n/a	n/a
37	CTCF	chr7:106853764-106853897	MCF-7	breast:	n/a	n/a
38	CTCF	chr7:106873892-106873912	GM12878	blood:	n/a	n/a
39	CTCF	chr7:106932500-106932650	GM12869	blood:	n/a	n/a
40	CTCF	chr7:106873815-106873816	H1-hESC	embryonic stem cell:	n/a	n/a
41	CTCF	chr7:106873774-106873954	MCF-7	breast:	n/a	chr7:106873888-106873901 chr7:106873885-106873903 chr7:106873887-106873908
42	CTCF	chr7:106873249-106873288	Gliobla	brain:	n/a	n/a
43	CTCF	chr7:106853760-106853910	MCF-7	breast:	n/a	n/a
44	CTCF	chr7:106853620-106853770	GM12871	blood:	n/a	n/a
45	CTCF	chr7:106853760-106853910	SK-N-SH_RA	brain:	n/a	n/a
46	CTCF	chr7:106851029-106851064	MCF-7	breast:	n/a	n/a
47	CTCF	chr7:106853860-106854010	HFF	foreskin:	n/a	n/a
48	CTCF	chr7:106853720-106853870	WI-38	lung:	n/a	n/a
49	CTCF	chr7:106873803-106874012	K562	blood:	n/a	chr7:106873888-106873901 chr7:106873885-106873903 chr7:106873887-106873908
50	CTCF	chr7:106853700-106853850	A549	lung:	n/a	n/a

(count:123 , 50 per page) page: 1 2 3

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:106865205-106865255	SAEC	small airway:	n/a
2	chr7:106865205-106865255	SAEC	small airway:	n/a
3	chr7:106874008-106874058	T-47D	breast:	n/a
4	chr7:106874008-106874058	HCM	heart:	n/a
5	chr7:106865205-106865255	HPAEpiC	pulmonary alveolar:	n/a
6	chr7:106874008-106874058	GM12878	blood:	n/a
7	chr7:106865205-106865255	SK-N-SH	brain:	n/a
8	chr7:106865205-106865255	GM12892	blood:	n/a
9	chr7:106865205-106865255	AG09319	gingival:	n/a
10	chr7:106865205-106865255	SK-N-MC	brain:	n/a
11	chr7:106874008-106874058	BJ	skin:	n/a
12	chr7:106865205-106865255	GM12878	blood:	n/a
13	chr7:106865205-106865255	U87	brain:	n/a
14	chr7:106865205-106865255	H1-hESC	embryonic stem cell:	embryo
15	chr7:106865205-106865255	AG04450	lung:	fetal
16	chr7:106865205-106865255	PFSK-1	brain:	n/a
17	chr7:106865205-106865255	NH-A	brain:	n/a
18	chr7:106865205-106865255	MCF10A-Er-Src	breast:	n/a
19	chr7:106874008-106874058	AG04450	lung:	fetal
20	chr7:106874008-106874058	Caco-2	colon:	n/a
21	chr7:106874008-106874058	HCF	heart:	n/a
22	chr7:106874008-106874058	AG09319	gingival:	n/a
23	chr7:106874008-106874058	ECC-1	luminal epithelium:	n/a
24	chr7:106874008-106874058	HRE	kidney:	n/a
25	chr7:106865205-106865255	HMEC	breast:	n/a
26	chr7:106874008-106874058	HRCEpiC	kidney:	n/a
27	chr7:106874008-106874058	NT2-D1	testis:	n/a
28	chr7:106874008-106874058	A549	lung:	n/a
29	chr7:106865205-106865255	HCPEpiC	choroid plexus:	n/a
30	chr7:106865205-106865255	AG09309	skin:	n/a
31	chr7:106874008-106874058	HEEpiC	esophagus:	n/a
32	chr7:106865205-106865255	SK-N-SH_RA	brain:	n/a
33	chr7:106865205-106865255	BE2_C	brain:	n/a
34	chr7:106865205-106865255	NHDF-neo	bronchial:	n/a
35	chr7:106874008-106874058	CMK	blood:	n/a
36	chr7:106865205-106865255	CMK	blood:	n/a
37	chr7:106865205-106865255	HRPEpiC	eye:	n/a
38	chr7:106865205-106865255	NHBE	bronchial:	n/a
39	chr7:106874008-106874058	PANC-1	pancreas:	n/a
40	chr7:106865205-106865255	IMR90	lung:	fetal
41	chr7:106865205-106865255	HCT-116	colon:	n/a
42	chr7:106865205-106865255	AoSMC	blood vessel:	n/a
43	chr7:106865205-106865255	HepG2	liver:	n/a
44	chr7:106874008-106874058	HAEpiC	amniotic membrane:	n/a
45	chr7:106865205-106865255	HUVEC	blood vessel:	n/a
46	chr7:106874008-106874058	HIPEpiC	eye:	n/a
47	chr7:106874008-106874058	GM12892	blood:	n/a
48	chr7:106874008-106874058	HEK293	kidney:	embryo
49	chr7:106874008-106874058	SKMC	muscle:	n/a
50	chr7:106874008-106874058	MCF-7	breast:	n/a

(count:74 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr7:106902439..106904593-chr7:106905205..106907557,2	K562	blood:
2	chr7:106849228..106851031-chr7:106852339..106854731,2	MCF-7	breast:
3	chr7:106937807..106940017-chr7:106943156..106944916,2	MCF-7	breast:
4	chr7:106902439..106904593-chr7:106905205..106907557,2	K562	blood:
5	chr7:106923644..106925368-chr7:106925978..106927798,2	K562	blood:
6	chr7:106877913..106879800-chr7:106888048..106890401,2	K562	blood:
7	chr7:106923986..106926392-chr7:106929216..106932117,2	K562	blood:
8	chr7:106808597..106811136-chr7:106920664..106923282,2	K562	blood:
9	chr7:106872926..106875366-chr7:106876350..106878360,2	MCF-7	breast:
10	chr7:106943945..106946694-chr7:106956421..106959648,3	K562	blood:
11	chr7:106860198..106862954-chr7:106874880..106877175,2	K562	blood:
12	chr7:106838412..106842841-chr7:106847097..106851611,6	K562	blood:
13	chr7:106928239..106930553-chr7:106930960..106933126,2	MCF-7	breast:
14	chr7:106867727..106869473-chr7:106870758..106873227,2	MCF-7	breast:
15	chr7:106861292..106863138-chr7:107221411..107223026,2	MCF-7	breast:
16	chr7:106928239..106930553-chr7:106930960..106933126,2	MCF-7	breast:
17	chr7:106890607..106892740-chr7:106903344..106904868,2	K562	blood:
18	chr7:106910309..106913032-chr7:106924327..106926583,2	K562	blood:
19	chr7:106860422..106863140-chr7:106865241..106868152,2	K562	blood:
20	chr7:106872926..106875366-chr7:106876350..106878360,2	MCF-7	breast:
21	chr7:106923644..106925368-chr7:106925978..106927798,2	K562	blood:
22	chr7:106926530..106928702-chr7:106956145..106958437,2	K562	blood:
23	chr7:106942508..106944552-chr7:106946505..106949146,2	MCF-7	breast:
24	chr7:106867953..106869939-chr7:106873583..106876575,2	K562	blood:
25	chr7:106827310..106829106-chr7:106852636..106856813,3	K562	blood:
26	chr7:106863033..106865746-chr7:107382552..107385425,2	MCF-7	breast:
27	chr7:106860422..106863140-chr7:106865241..106868152,2	K562	blood:
28	chr7:106893843..106895798-chr7:107222460..107225695,3	K562	blood:
29	chr7:106923986..106926392-chr7:106929216..106932117,2	K562	blood:
30	chr7:106912900..106916299-chr7:106917013..106920101,3	K562	blood:
31	chr7:106841256..106844464-chr7:106865963..106869229,3	K562	blood:
32	chr7:106937175..106939993-chr7:106946887..106948924,2	K562	blood:
33	chr7:106867727..106869473-chr7:106870758..106873227,2	MCF-7	breast:
34	chr7:106869281..106872161-chr7:106872370..106874834,2	K562	blood:
35	chr7:106937807..106940017-chr7:106943156..106944916,2	MCF-7	breast:
36	chr7:106910309..106913032-chr7:106924327..106926583,2	K562	blood:
37	chr7:106852681..106856465-chr7:106859214..106862560,3	K562	blood:
38	chr7:106944112..106947438-chr7:106948348..106951754,4	K562	blood:
39	chr7:106849189..106851803-chr7:106991183..106993127,2	K562	blood:
40	chr7:106807584..106809378-chr7:106851655..106853238,2	K562	blood:
41	chr7:106853908..106855772-chr7:106856508..106858424,2	K562	blood:
42	chr7:106850452..106852711-chr7:106857094..106858643,3	K562	blood:
43	chr7:106784413..106787284-chr7:106859324..106862158,2	K562	blood:
44	chr7:106807878..106810234-chr7:106851655..106854013,2	K562	blood:
45	chr7:106808462..106810785-chr7:106940399..106942038,2	MCF-7	breast:
46	chr7:106877913..106879800-chr7:106888048..106890401,2	K562	blood:
47	chr7:106808669..106811412-chr7:106867096..106868996,2	K562	blood:
48	chr7:106909940..106911520-chr7:106918365..106920209,2	K562	blood:
49	chr7:106850452..106852711-chr7:106857094..106858643,3	K562	blood:
50	chr7:106939523..106941482-chr7:106941827..106943489,2	K562	blood:

No data

Variant related genes	Relation type
COG5	TF binding region
ENSG00000221356	TF binding region
COG5	CpG island
ENSG00000221356	CpG island
ENSG00000105879	chromatin interactions
ENSG00000241764	chromatin interactions
ENSG00000075790	chromatin interactions
ENSG00000164414	chromatin interactions
ENSG00000164597	chromatin interactions
ENSG00000105856	chromatin interactions

Extended variants
information (count: 3365 )
Associated
traits (count: 83 )

Variant overlapped rSNPs/rCNVs (count:3365 , 50 per page) page: 1 2 3 4 5 6 7 ... 68

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs6949961	chr7:106850755-106850756	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs548546674	chr7:106850764-106850765	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs150750996	chr7:106850783-106850784	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs566472624	chr7:106850815-106850816	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
5	rs138246683	chr7:106850826-106850827	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
6	rs191164575	chr7:106850850-106850851	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
7	rs575209243	chr7:106850888-106850889	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
8	rs73415411	chr7:106850938-106850939	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
9	rs11551827	chr7:106851001-106851002	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
10	rs201185220	chr7:106851010-106851011	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
11	rs149616917	chr7:106851019-106851020	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
12	rs184760203	chr7:106851047-106851048	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
13	rs559487960	chr7:106851078-106851079	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
14	rs375340182	chr7:106851079-106851080	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
15	rs7784140	chr7:106851102-106851103	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
16	rs541886423	chr7:106851115-106851116	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs189168150	chr7:106851120-106851121	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
18	rs530476928	chr7:106851121-106851122	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
19	rs550598999	chr7:106851187-106851188	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
20	rs112100435	chr7:106851188-106851189	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
21	rs148809465	chr7:106851200-106851201	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
22	rs75776663	chr7:106851239-106851240	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
23	rs720823	chr7:106851345-106851346	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
24	rs181562845	chr7:106851384-106851385	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
25	rs567035616	chr7:106851401-106851402	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
26	rs143562937	chr7:106851422-106851423	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
27	rs45511596	chr7:106851440-106851441	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
28	rs372358257	chr7:106851470-106851471	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
29	rs537798506	chr7:106851476-106851477	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
30	rs367690208	chr7:106851484-106851485	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
31	rs199932341	chr7:106851501-106851502	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
32	rs539702507	chr7:106851508-106851509	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
33	rs189995949	chr7:106851512-106851513	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
34	rs572965648	chr7:106851516-106851517	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
35	rs377392848	chr7:106851536-106851537	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
36	rs370066143	chr7:106851567-106851568	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
37	rs145648013	chr7:106851568-106851569	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
38	rs148259908	chr7:106851570-106851571	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
39	rs374402677	chr7:106851607-106851608	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
40	rs114023726	chr7:106851618-106851619	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
41	rs374796275	chr7:106851624-106851625	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
42	rs150808289	chr7:106851635-106851636	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
43	rs547247532	chr7:106851666-106851667	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
44	rs200895224	chr7:106851676-106851677	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
45	rs202225339	chr7:106851677-106851678	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
46	rs376350593	chr7:106851717-106851718	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
47	rs549166901	chr7:106851740-106851741	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
48	rs569153247	chr7:106851747-106851748	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
49	rs1018946	chr7:106851754-106851755	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
50	rs551493905	chr7:106851822-106851823	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:83)

Disease	PMID	Source
Basal cell lymphoma	17170743	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Medulloblastoma	21979893	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Melanoma	18172304	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
Non-small cell lung cancer	21829676	CNVD
Glioblastoma multiforme	17002787	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Lissencephaly	21572526	CNVD
Breast cancer	17603634	CNVD
Liposarcoma	21253554	CNVD
Breast cancer	16397240	CNVD
Acute myeloid leukemia	16864856	CNVD
Squamous cell cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	17387387	CNVD
Low-grade fibromyxoid sarcoma	0	CNVD
Oligodendroglial tumors	17285580	CNVD
Endometrial cancer	22040021	CNVD
Burkitt''s lymphoma	18698080	CNVD
Breast cancer	21264507	CNVD
Shwachman-Diamond syndrome	22934832	CNVD
Colorectal cancer	19359472	CNVD
Cutaneous malignant melanoma	17690212	CNVD
Leukemia	17361228	CNVD
Breast cancer	16461572	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Malignant melanoma	17690212	CNVD
Renal cell carcinoma	18592004	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Multiple myeloma	17550852	CNVD
small cell lung cancer	20016488	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Neurodevelopmental disorder	22521361	CNVD
abortions and stillbirths	19751515	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Acute myeloid leukemia	20729466	CNVD
Lung cancer	18438408	CNVD
Metanephric adenoma	20802469	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Burkitt''s lymphoma	19759907	CNVD
Malignant melanoma	17260012	CNVD
Myelodysplastic syndrome	21251322	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	21785460	CNVD
Chronic myeloid leukemia	21384125	CNVD
Breast cancer	21858162	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Autism	19401682	CNVD
Neuroticism	17667963	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Breast cancer	21364760	CNVD
lymphocytic leukemia	21291569	CNVD
Basal cell lymphoma	17053054	CNVD
Prostate cancer	16573809	CNVD
Medulloblastoma	16783165	CNVD
Melanoma	17363583	CNVD
Squamous cell cancer	20885788	CNVD
Myelofibrosis	22110671	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Multiple myeloma	16461302	CNVD
Cancer	20164919	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Chordoma	21215367	CNVD

Chromatin state (count:1272 , 50 per page) page: 1 2 3 4 5 6 7 ... 26

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:106817400-106851400	Strong transcription	Primary B cells from peripheral blood	blood
2	chr7:106819600-106851800	Strong transcription	Primary monocytes fromperipheralblood	blood
3	chr7:106819800-106851600	Strong transcription	Dnd41	blood
4	chr7:106820000-106851200	Strong transcription	Primary neutrophils fromperipheralblood	blood
5	chr7:106820000-106851600	Strong transcription	Monocytes-CD14+_RO01746	blood
6	chr7:106820200-106851200	Strong transcription	Primary B cells from cord blood	blood
7	chr7:106820200-106851800	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
8	chr7:106820200-106851800	Strong transcription	Fetal Thymus	thymus
9	chr7:106821000-106854600	Strong transcription	Primary T cells from cord blood	blood
10	chr7:106821200-106851800	Strong transcription	Primary T cells fromperipheralblood	blood
11	chr7:106821200-106851800	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
12	chr7:106821200-106851800	Strong transcription	Rectal Mucosa Donor 29	rectum
13	chr7:106821400-106851800	Strong transcription	Duodenum Mucosa	Duodenum
14	chr7:106821600-106851600	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
15	chr7:106821600-106851800	Strong transcription	Primary T helper cells fromperipheralblood	blood
16	chr7:106821800-106851400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
17	chr7:106823000-106851200	Strong transcription	Primary T helper 17 cells PMA-I stimulated	--
18	chr7:106828600-106851800	Strong transcription	Fetal Intestine Large	intestine
19	chr7:106828800-106851200	Strong transcription	Primary T helper cells PMA-I stimulated	--
20	chr7:106832000-106852400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
21	chr7:106834200-106851600	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
22	chr7:106834800-106851000	Strong transcription	Thymus	Thymus
23	chr7:106835200-106851800	Strong transcription	Primary hematopoietic stem cells short term culture	blood
24	chr7:106835400-106852200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
25	chr7:106835800-106851000	Strong transcription	Primary T helper naive cells from peripheral blood	blood
26	chr7:106835800-106851600	Strong transcription	Fetal Muscle Leg	muscle
27	chr7:106836200-106852000	Strong transcription	Fetal Muscle Trunk	muscle
28	chr7:106836400-106851200	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
29	chr7:106837000-106851000	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
30	chr7:106838200-106865200	Weak transcription	Stomach Mucosa	stomach
31	chr7:106840000-106853400	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
32	chr7:106841200-106853000	Weak transcription	Small Intestine	intestine
33	chr7:106841600-106855000	Weak transcription	Pancreatic Islets	Pancreatic Islet
34	chr7:106841800-106851000	Strong transcription	HepG2	liver
35	chr7:106842600-106852000	Weak transcription	H1 Cell Line	embryonic stem cell
36	chr7:106844000-106870400	Weak transcription	Placenta Amnion	Placenta Amnion
37	chr7:106844200-106873200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
38	chr7:106844600-106851400	Weak transcription	HUVEC	blood vessel
39	chr7:106844600-106853800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
40	chr7:106844600-106873600	Weak transcription	HUES6 Cell Line	embryonic stem cell
41	chr7:106844600-106880400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
42	chr7:106844600-106888400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
43	chr7:106844800-106852000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
44	chr7:106845000-106851800	Strong transcription	Fetal Stomach	stomach
45	chr7:106845600-106851200	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
46	chr7:106846000-106925800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
47	chr7:106846200-106870600	Weak transcription	NH-A	brain
48	chr7:106846400-106853400	Weak transcription	Brain Germinal Matrix	brain
49	chr7:106846400-106862400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
50	chr7:106847000-106851000	Weak transcription	A549	lung

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links