Variant report

Variant	rs1018946
Chromosome Location	chr7:106851754-106851755
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr7:106842331..106847255-chr7:106851023..106853343,4	K562	blood:
2	chr7:106807878..106810234-chr7:106851655..106854013,2	K562	blood:
3	chr7:106850452..106852711-chr7:106857094..106858643,3	K562	blood:
4	chr7:106828812..106831319-chr7:106849503..106851768,3	K562	blood:
5	chr7:106849189..106851803-chr7:106991183..106993127,2	K562	blood:
6	chr6:88181262..88183827-chr7:106850757..106852594,2	MCF-7	breast:
7	chr7:106807584..106809378-chr7:106851655..106853238,2	K562	blood:

Variant related genes	Relation type
ENSG00000164414	Chromatin interaction
ENSG00000105856	Chromatin interaction

Extended variants
information (count: 157 )
Associated
traits (count: 6 )

rSNPs within LD-proxies of this variant (count:153)

rs_ID	r²[population]
rs1002935	1.00[CEU][hapmap];0.85[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1018947	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10253172	0.84[CEU][hapmap];0.91[AMR][1000 genomes]
rs10253291	0.84[CEU][hapmap];0.83[AMR][1000 genomes]
rs10487271	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10953529	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10953530	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10953531	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10953533	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10953534	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10953535	0.91[AFR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10953537	0.91[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs1121312	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11761181	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11762152	0.84[ASN][1000 genomes]
rs11764448	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11766060	0.87[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs11767623	0.89[AMR][1000 genomes]
rs11769527	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11769861	0.82[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11769901	0.83[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11773514	0.85[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12154285	0.82[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12531187	0.81[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12532447	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12532849	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12532953	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12532967	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12533516	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12533767	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12534000	0.84[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12534676	0.86[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12535081	0.82[EUR][1000 genomes]
rs12535258	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs12535814	0.95[ASN][1000 genomes]
rs12536485	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12536491	1.00[ASN][1000 genomes]
rs12536574	0.96[AMR][1000 genomes];0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12536603	0.97[ASN][1000 genomes]
rs12537011	0.91[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs12537374	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12537730	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12537733	0.83[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12538090	0.81[EUR][1000 genomes]
rs12538769	0.82[EUR][1000 genomes]
rs12538848	0.82[EUR][1000 genomes]
rs12540475	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12705405	0.81[CEU][hapmap];0.89[AMR][1000 genomes]
rs1548523	0.86[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1548524	0.86[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs17349904	1.00[ASW][hapmap];1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs17350182	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs17427123	0.96[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs17427158	0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs17427849	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs17428071	1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs17428126	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs17428504	0.80[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs17429118	0.84[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs17429146	0.84[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1981696	0.84[CEU][hapmap];0.86[GIH][hapmap];0.93[MEX][hapmap];0.87[TSI][hapmap];0.89[AMR][1000 genomes]
rs1989814	0.91[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs2023892	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2107318	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2107319	1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2189501	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2249043	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.84[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2299422	0.84[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2395859	0.96[ASN][1000 genomes]
rs257371	0.89[AMR][1000 genomes]
rs257372	0.89[AMR][1000 genomes]
rs257373	0.89[AMR][1000 genomes]
rs257375	0.92[GIH][hapmap];0.87[TSI][hapmap];0.89[AMR][1000 genomes]
rs257377	0.84[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.89[TSI][hapmap];0.89[AMR][1000 genomes]
rs257378	0.84[CEU][hapmap];0.91[AMR][1000 genomes]
rs257379	0.83[AMR][1000 genomes]
rs257381	0.89[AMR][1000 genomes]
rs257382	0.89[AMR][1000 genomes]
rs257385	0.91[AMR][1000 genomes]
rs257386	0.91[AMR][1000 genomes]
rs257387	0.84[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.92[TSI][hapmap];0.89[AMR][1000 genomes]
rs2894459	1.00[CEU][hapmap];0.88[CHB][hapmap];1.00[JPT][hapmap];1.00[MKK][hapmap];0.97[TSI][hapmap];0.84[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3729876	0.84[CEU][hapmap];0.96[GIH][hapmap];1.00[MEX][hapmap];0.89[TSI][hapmap];0.91[AMR][1000 genomes]
rs3729877	0.84[CEU][hapmap];0.96[GIH][hapmap];0.93[MEX][hapmap];0.89[TSI][hapmap];0.89[AMR][1000 genomes]
rs3757713	0.95[ASN][1000 genomes]
rs3779498	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3779500	0.84[CEU][hapmap];0.93[GIH][hapmap];0.93[MEX][hapmap];0.89[TSI][hapmap];0.89[AMR][1000 genomes]
rs3801958	0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3801959	0.85[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3801963	1.00[CEU][hapmap];0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3801965	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3815148	0.88[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3823959	0.91[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs3823960	0.91[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs4727670	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4727671	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4730222	0.91[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs4730223	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.93[MEX][hapmap];0.97[TSI][hapmap];0.93[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4730224	0.96[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4730226	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4730227	0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4730228	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4730229	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4730231	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4730232	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4730233	0.82[EUR][1000 genomes]
rs57525841	0.81[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs58319984	0.83[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs58663672	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59900773	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60255281	0.83[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs61014091	0.83[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs61406169	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs61511581	0.86[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs61673847	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6466160	0.84[CEU][hapmap];0.89[AMR][1000 genomes]
rs6466162	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6946036	1.00[ASW][hapmap];0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];0.86[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6946931	0.84[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.92[TSI][hapmap];0.91[AMR][1000 genomes]
rs6947675	1.00[CEU][hapmap];0.96[AMR][1000 genomes];0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6947857	0.84[CEU][hapmap];0.91[AMR][1000 genomes]
rs6949961	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6951639	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6960148	0.84[CEU][hapmap];0.91[AMR][1000 genomes]
rs6960813	0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6963917	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6964798	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6964966	1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6965001	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6967638	0.85[EUR][1000 genomes]
rs6967639	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6967745	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6971675	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6971774	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6977868	0.81[CEU][hapmap];0.91[AMR][1000 genomes]
rs7777976	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7779062	0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7781947	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7783181	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7783562	0.97[ASN][1000 genomes]
rs7789500	0.92[ASN][1000 genomes]
rs7789678	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7793594	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7794598	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap]
rs7794915	0.93[CHB][hapmap];1.00[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.87[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs7794965	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7798223	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7800443	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7803290	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7807648	0.83[EUR][1000 genomes]
rs7981	0.94[CEU][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9641378	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs997311	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831087	chr7:106673465-106872460	Active TSS Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
2	esv3383027	chr7:106802625-107096474	Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
3	nsv888939	chr7:106849393-107045700	ZNF genes & repeats Strong transcription Weak transcription Enhancers Active TSS Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region miRNA target site	8 gene(s)	inside rSNPs	diseases
4	esv2756226	chr7:106850755-106944563	Weak transcription Strong transcription Enhancers ZNF genes & repeats Genic enhancers Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases

mRNA abundance (count:6)

SNP	Gene	Cis/trans	Tissue	Source
rs1018946	NRCAM	cis	parietal	SCAN
rs1018946	LHFPL3	cis	parietal	SCAN
rs1018946	ATXN7L1	cis	parietal	SCAN
rs1018946	ZNF284	trans	cerebellum	SCAN
rs1018946	BCAP29	cis	parietal	SCAN
rs1018946	GPR22	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:113 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:106819600-106851800	Strong transcription	Primary monocytes fromperipheralblood	blood
2	chr7:106820200-106851800	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
3	chr7:106820200-106851800	Strong transcription	Fetal Thymus	thymus
4	chr7:106821000-106854600	Strong transcription	Primary T cells from cord blood	blood
5	chr7:106821200-106851800	Strong transcription	Primary T cells fromperipheralblood	blood
6	chr7:106821200-106851800	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
7	chr7:106821200-106851800	Strong transcription	Rectal Mucosa Donor 29	rectum
8	chr7:106821400-106851800	Strong transcription	Duodenum Mucosa	Duodenum
9	chr7:106821600-106851800	Strong transcription	Primary T helper cells fromperipheralblood	blood
10	chr7:106828600-106851800	Strong transcription	Fetal Intestine Large	intestine
11	chr7:106832000-106852400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
12	chr7:106835200-106851800	Strong transcription	Primary hematopoietic stem cells short term culture	blood
13	chr7:106835400-106852200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
14	chr7:106836200-106852000	Strong transcription	Fetal Muscle Trunk	muscle
15	chr7:106838200-106865200	Weak transcription	Stomach Mucosa	stomach
16	chr7:106840000-106853400	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
17	chr7:106841200-106853000	Weak transcription	Small Intestine	intestine
18	chr7:106841600-106855000	Weak transcription	Pancreatic Islets	Pancreatic Islet
19	chr7:106842600-106852000	Weak transcription	H1 Cell Line	embryonic stem cell
20	chr7:106844000-106870400	Weak transcription	Placenta Amnion	Placenta Amnion
21	chr7:106844200-106873200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
22	chr7:106844600-106853800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
23	chr7:106844600-106873600	Weak transcription	HUES6 Cell Line	embryonic stem cell
24	chr7:106844600-106880400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
25	chr7:106844600-106888400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
26	chr7:106844800-106852000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
27	chr7:106845000-106851800	Strong transcription	Fetal Stomach	stomach
28	chr7:106846000-106925800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
29	chr7:106846200-106870600	Weak transcription	NH-A	brain
30	chr7:106846400-106853400	Weak transcription	Brain Germinal Matrix	brain
31	chr7:106846400-106862400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
32	chr7:106847600-106852400	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
33	chr7:106848400-106853200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
34	chr7:106848800-106854000	Weak transcription	Fetal Brain Female	brain
35	chr7:106849000-106873200	Weak transcription	Brain Anterior Caudate	brain
36	chr7:106849200-106867800	Weak transcription	Brain Hippocampus Middle	brain
37	chr7:106849200-106872600	Weak transcription	HSMM	muscle
38	chr7:106849400-106853400	Weak transcription	Right Atrium	heart
39	chr7:106849600-106852000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
40	chr7:106849600-106853800	Weak transcription	Placenta	Placenta
41	chr7:106849800-106853800	Weak transcription	Psoas Muscle	Psoas
42	chr7:106850000-106851800	Strong transcription	Breast Myoepithelial Primary Cells	Breast
43	chr7:106850200-106853800	Weak transcription	NHLF	lung
44	chr7:106850400-106890000	Weak transcription	Hela-S3	cervix
45	chr7:106850600-106852400	Strong transcription	Primary hematopoietic stem cells	blood
46	chr7:106850600-106853400	Weak transcription	Right Ventricle	heart
47	chr7:106850600-106860600	Weak transcription	Skeletal Muscle Male	skeletal muscle
48	chr7:106850800-106852400	Weak transcription	HUES48 Cell Line	embryonic stem cell
49	chr7:106850800-106854200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
50	chr7:106850800-106865400	Weak transcription	Fetal Lung	lung

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links