The 2.0 version of rSNPBase

Variant report

Variant rs3779498
Chromosome Location chr7:106923158-106923159
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:106846000-106925800 Weak transcription Primary T killer naive cells fromperipheralblood blood
2 chr7:106851000-106946000 Weak transcription Esophagus oesophagus
3 chr7:106853400-106925600 Weak transcription Primary T killer memory cells from peripheral blood blood
4 chr7:106874000-106929200 Weak transcription NH-A brain
5 chr7:106874000-106945600 Weak transcription Pancreas Pancrea
6 chr7:106886400-106971400 Weak transcription Fetal Muscle Trunk muscle
7 chr7:106886800-106946000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr7:106887000-106935800 Weak transcription Small Intestine intestine
9 chr7:106888600-106926600 Weak transcription Ovary ovary
10 chr7:106888600-106930800 Weak transcription Primary hematopoietic stem cells short term culture blood
11 chr7:106888600-106931600 Weak transcription Dnd41 blood
12 chr7:106888800-106930800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr7:106888800-106932000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr7:106888800-106933400 Weak transcription Fetal Stomach stomach
15 chr7:106888800-106946000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
16 chr7:106888800-106946200 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr7:106888800-106999400 Weak transcription Sigmoid Colon Sigmoid Colon
18 chr7:106889000-106933400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr7:106889000-106934400 Weak transcription Primary T regulatory cells fromperipheralblood blood
20 chr7:106890800-106945600 Weak transcription Aorta Aorta
21 chr7:106891000-106931000 Weak transcription Primary hematopoietic stem cells blood
22 chr7:106898800-106927000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr7:106899200-106933600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
24 chr7:106903800-106924200 Weak transcription Brain Hippocampus Middle brain
25 chr7:106904800-106959800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
26 chr7:106907000-106933600 Weak transcription Fetal Adrenal Gland Adrenal Gland
27 chr7:106908200-106933600 Weak transcription Primary T helper naive cells fromperipheralblood blood
28 chr7:106908600-106933000 Weak transcription Liver Liver
29 chr7:106909000-106932200 Weak transcription NHEK skin
30 chr7:106909000-106968600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
31 chr7:106910200-106946400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
32 chr7:106910600-106927400 Weak transcription Adipose Nuclei Adipose
33 chr7:106911000-106926200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr7:106911000-106927600 Weak transcription Psoas Muscle Psoas
35 chr7:106911000-106930400 Weak transcription Fetal Intestine Large intestine
36 chr7:106911000-106932000 Weak transcription K562 blood
37 chr7:106911000-106933600 Weak transcription Lung lung
38 chr7:106911000-106964200 Weak transcription Duodenum Mucosa Duodenum
39 chr7:106911800-106946000 Weak transcription Fetal Intestine Small intestine
40 chr7:106912400-106934200 Weak transcription Primary T helper naive cells from peripheral blood blood
41 chr7:106915200-106953400 Weak transcription Left Ventricle heart
42 chr7:106915800-106931000 Weak transcription Primary T cells from cord blood blood
43 chr7:106918000-106936000 Weak transcription HSMMtube muscle
44 chr7:106918000-106939000 Weak transcription GM12878-XiMat blood
45 chr7:106918200-106924800 Weak transcription Skeletal Muscle Male skeletal muscle
46 chr7:106918600-106963800 Weak transcription HSMM muscle
47 chr7:106919800-106924400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
48 chr7:106919800-106924600 Weak transcription Colonic Mucosa Colon
49 chr7:106920200-106924200 Strong transcription Monocytes-CD14+_RO01746 blood
50 chr7:106921200-106936400 Weak transcription HUVEC blood vessel

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Last update: Aug 31, 2015