The 2.0 version of rSNPBase

Variant report

Variant rs3801963
Chromosome Location chr7:106898036-106898037
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:106846000-106925800 Weak transcription Primary T killer naive cells fromperipheralblood blood
2 chr7:106851000-106946000 Weak transcription Esophagus oesophagus
3 chr7:106853400-106925600 Weak transcription Primary T killer memory cells from peripheral blood blood
4 chr7:106866600-106909600 Weak transcription Placenta Placenta
5 chr7:106874000-106917800 Weak transcription Osteobl bone
6 chr7:106874000-106922600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
7 chr7:106874000-106929200 Weak transcription NH-A brain
8 chr7:106874000-106945600 Weak transcription Pancreas Pancrea
9 chr7:106875400-106908000 Weak transcription HMEC breast
10 chr7:106875600-106898400 Weak transcription HUVEC blood vessel
11 chr7:106883000-106918800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr7:106883400-106910200 Weak transcription Lung lung
13 chr7:106883400-106911400 Weak transcription Right Ventricle heart
14 chr7:106886400-106971400 Weak transcription Fetal Muscle Trunk muscle
15 chr7:106886800-106946000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr7:106887000-106935800 Weak transcription Small Intestine intestine
17 chr7:106887400-106898200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr7:106887600-106910200 Weak transcription Adipose Nuclei Adipose
19 chr7:106887600-106910400 Weak transcription Psoas Muscle Psoas
20 chr7:106887800-106903000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
21 chr7:106888400-106900600 Weak transcription Stomach Smooth Muscle stomach
22 chr7:106888600-106899000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr7:106888600-106910000 Weak transcription Duodenum Mucosa Duodenum
24 chr7:106888600-106926600 Weak transcription Ovary ovary
25 chr7:106888600-106930800 Weak transcription Primary hematopoietic stem cells short term culture blood
26 chr7:106888600-106931600 Weak transcription Dnd41 blood
27 chr7:106888800-106910200 Weak transcription Breast Myoepithelial Primary Cells Breast
28 chr7:106888800-106910200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr7:106888800-106910200 Weak transcription Rectal Mucosa Donor 29 rectum
30 chr7:106888800-106911400 Weak transcription Fetal Intestine Small intestine
31 chr7:106888800-106913200 Weak transcription Primary T helper cells fromperipheralblood blood
32 chr7:106888800-106917400 Weak transcription HSMM muscle
33 chr7:106888800-106930800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr7:106888800-106932000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr7:106888800-106933400 Weak transcription Fetal Stomach stomach
36 chr7:106888800-106946000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
37 chr7:106888800-106946200 Weak transcription Rectal Mucosa Donor 31 rectum
38 chr7:106888800-106999400 Weak transcription Sigmoid Colon Sigmoid Colon
39 chr7:106889000-106900800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
40 chr7:106889000-106902600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
41 chr7:106889000-106910200 Weak transcription Fetal Muscle Leg muscle
42 chr7:106889000-106933400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr7:106889000-106934400 Weak transcription Primary T regulatory cells fromperipheralblood blood
44 chr7:106889200-106898800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
45 chr7:106889200-106910200 Weak transcription Monocytes-CD14+_RO01746 blood
46 chr7:106889200-106914800 Weak transcription Primary monocytes fromperipheralblood blood
47 chr7:106889200-106922600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr7:106889600-106920400 Weak transcription Primary T helper cells PMA-I stimulated --
49 chr7:106889800-106909800 Weak transcription Fetal Intestine Large intestine
50 chr7:106890000-106902800 Weak transcription Primary B cells from cord blood blood

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Last update: Aug 31, 2015