The 2.0 version of rSNPBase

Variant report

Variant rs12534000
Chromosome Location chr7:106963934-106963935
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:106886400-106971400 Weak transcription Fetal Muscle Trunk muscle
2 chr7:106888800-106999400 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr7:106909000-106968600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
4 chr7:106911000-106964200 Weak transcription Duodenum Mucosa Duodenum
5 chr7:106923000-106965800 Weak transcription Duodenum Smooth Muscle Duodenum
6 chr7:106923800-106999400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
7 chr7:106928000-106972600 Weak transcription Fetal Muscle Leg muscle
8 chr7:106932200-106967400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr7:106934200-106967400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr7:106934200-106968600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr7:106934200-106971600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
12 chr7:106934200-106973000 Weak transcription Adipose Nuclei Adipose
13 chr7:106934400-106967200 Weak transcription Fetal Stomach stomach
14 chr7:106934400-106971400 Weak transcription Ovary ovary
15 chr7:106935400-106964000 Weak transcription Primary T regulatory cells fromperipheralblood blood
16 chr7:106943000-106973000 Weak transcription Thymus Thymus
17 chr7:106945800-106973000 Weak transcription Right Ventricle heart
18 chr7:106946200-106967200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr7:106946200-106999800 Weak transcription Rectal Mucosa Donor 29 rectum
20 chr7:106946400-106968000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr7:106946400-106968000 Weak transcription NHEK skin
22 chr7:106946400-106968200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
23 chr7:106946400-106971400 Weak transcription Esophagus oesophagus
24 chr7:106946400-106973000 Weak transcription Primary monocytes fromperipheralblood blood
25 chr7:106946400-106978400 Weak transcription Fetal Intestine Large intestine
26 chr7:106946400-106983600 Weak transcription Aorta Aorta
27 chr7:106946400-106983600 Weak transcription Fetal Intestine Small intestine
28 chr7:106946400-106999400 Weak transcription Pancreas Pancrea
29 chr7:106948600-106973400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
30 chr7:106952400-106973600 Weak transcription Primary T killer naive cells fromperipheralblood blood
31 chr7:106953800-106999400 Weak transcription Left Ventricle heart
32 chr7:106954200-106967800 Weak transcription Primary T cells from cord blood blood
33 chr7:106954200-106968000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr7:106954400-106971200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr7:106954600-106973000 Weak transcription Primary T helper naive cells fromperipheralblood blood
36 chr7:106955400-106973000 Weak transcription Lung lung
37 chr7:106956600-106967400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr7:106956800-106964000 Weak transcription Stomach Mucosa stomach
39 chr7:106957000-106965800 Weak transcription Cortex derived primary cultured neurospheres brain
40 chr7:106959400-106964600 Weak transcription A549 lung
41 chr7:106959400-106973400 Weak transcription NHDF-Ad bronchial
42 chr7:106960000-106971000 Weak transcription Fetal Lung lung
43 chr7:106960000-106978200 Weak transcription Rectal Mucosa Donor 31 rectum
44 chr7:106960400-106972400 Weak transcription Psoas Muscle Psoas
45 chr7:106960600-106974800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
46 chr7:106961000-106967200 Weak transcription Fetal Adrenal Gland Adrenal Gland
47 chr7:106961000-106968600 Weak transcription Osteobl bone
48 chr7:106961200-106967400 Weak transcription Primary hematopoietic stem cells blood
49 chr7:106961200-106973000 Weak transcription Primary T killer memory cells from peripheral blood blood
50 chr7:106961200-106973400 Weak transcription Dnd41 blood

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Last update: Aug 31, 2015