The 2.0 version of rSNPBase

Variant report

Variant rs17428071
Chromosome Location chr7:106878200-106878201
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:106844600-106880400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
2 chr7:106844600-106888400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
3 chr7:106846000-106925800 Weak transcription Primary T killer naive cells fromperipheralblood blood
4 chr7:106850400-106890000 Weak transcription Hela-S3 cervix
5 chr7:106850800-106895200 Weak transcription Colon Smooth Muscle Colon
6 chr7:106851000-106897600 Weak transcription Primary T helper naive cells from peripheral blood blood
7 chr7:106851000-106946000 Weak transcription Esophagus oesophagus
8 chr7:106851200-106882200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr7:106851200-106888200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
10 chr7:106851200-106892400 Weak transcription Gastric stomach
11 chr7:106851200-106892600 Weak transcription Rectal Smooth Muscle rectum
12 chr7:106853400-106925600 Weak transcription Primary T killer memory cells from peripheral blood blood
13 chr7:106855600-106883000 Weak transcription Dnd41 blood
14 chr7:106860200-106882600 Weak transcription Fetal Muscle Trunk muscle
15 chr7:106863800-106887400 Weak transcription Thymus Thymus
16 chr7:106864000-106878400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr7:106864000-106889600 Weak transcription Spleen Spleen
18 chr7:106865000-106887000 Weak transcription Stomach Smooth Muscle stomach
19 chr7:106865200-106884400 Weak transcription Fetal Muscle Leg muscle
20 chr7:106865400-106884400 Weak transcription Fetal Thymus thymus
21 chr7:106865600-106888200 Weak transcription Rectal Mucosa Donor 31 rectum
22 chr7:106865600-106890600 Weak transcription Aorta Aorta
23 chr7:106865600-106892400 Weak transcription HepG2 liver
24 chr7:106865800-106882600 Weak transcription Lung lung
25 chr7:106866000-106879000 Weak transcription Primary T helper naive cells fromperipheralblood blood
26 chr7:106866600-106882400 Weak transcription Fetal Stomach stomach
27 chr7:106866600-106909600 Weak transcription Placenta Placenta
28 chr7:106866800-106884600 Weak transcription Liver Liver
29 chr7:106867000-106888000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
30 chr7:106867800-106884400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr7:106867800-106884600 Weak transcription Adipose Nuclei Adipose
32 chr7:106867800-106889800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
33 chr7:106868400-106883000 Weak transcription Primary hematopoietic stem cells short term culture blood
34 chr7:106870800-106887600 Weak transcription Primary T regulatory cells fromperipheralblood blood
35 chr7:106871200-106882000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr7:106871400-106884800 Weak transcription Duodenum Smooth Muscle Duodenum
37 chr7:106871600-106889800 Weak transcription NHDF-Ad bronchial
38 chr7:106872000-106889800 Weak transcription Fetal Lung lung
39 chr7:106873200-106878400 Strong transcription Primary B cells from cord blood blood
40 chr7:106873800-106882400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr7:106873800-106882400 Weak transcription Right Ventricle heart
42 chr7:106874000-106884200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
43 chr7:106874000-106888200 Weak transcription Sigmoid Colon Sigmoid Colon
44 chr7:106874000-106888200 Weak transcription Skeletal Muscle Female skeletal muscle
45 chr7:106874000-106890200 Weak transcription GM12878-XiMat blood
46 chr7:106874000-106917800 Weak transcription Osteobl bone
47 chr7:106874000-106922600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
48 chr7:106874000-106929200 Weak transcription NH-A brain
49 chr7:106874000-106945600 Weak transcription Pancreas Pancrea
50 chr7:106874200-106884200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --

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Last update: Aug 31, 2015