Variant report

Variant	rs2023892
Chromosome Location	chr7:106847686-106847687
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr7:106841974..106843940-chr7:106847198..106849024,2	MCF-7	breast:
2	chr7:106838224..106841860-chr7:106847097..106850411,5	K562	blood:
3	chr7:106838412..106842841-chr7:106847097..106851611,6	K562	blood:
4	chr7:106844012..106846635-chr7:106846646..106848809,2	K562	blood:
5	chr7:106833261..106834948-chr7:106846398..106848548,2	K562	blood:
6	chr7:106845720..106848557-chr7:107077031..107079776,2	K562	blood:

Variant related genes	Relation type
ENSG00000272072	Chromatin interaction

Extended variants
information (count: 155 )
Associated
traits (count: 7 )

rSNPs within LD-proxies of this variant (count:153)

rs_ID	r²[population]
rs1002935	1.00[CEU][hapmap];0.85[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1018946	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1018947	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10253172	0.84[CEU][hapmap];0.91[AMR][1000 genomes]
rs10253291	0.84[CEU][hapmap];0.83[AMR][1000 genomes]
rs10487271	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10953529	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10953530	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10953531	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10953533	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10953534	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10953535	0.82[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10953537	0.93[ASN][1000 genomes]
rs1121312	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11761181	0.84[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11762152	0.87[ASN][1000 genomes]
rs11764448	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11766060	0.87[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs11767623	0.89[AMR][1000 genomes]
rs11769527	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11769861	0.82[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11769901	0.83[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11773514	0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12154285	0.82[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12531187	0.81[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12532447	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12532849	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12532953	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12532967	0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12533516	0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12533767	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12534000	0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12534676	0.86[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12535081	0.82[EUR][1000 genomes]
rs12535258	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs12535814	0.92[ASN][1000 genomes]
rs12536485	0.82[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12536491	0.97[ASN][1000 genomes]
rs12536574	0.96[AMR][1000 genomes];0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12536603	0.95[ASN][1000 genomes]
rs12537011	0.93[ASN][1000 genomes]
rs12537374	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12537730	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12537733	0.83[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12538090	0.81[EUR][1000 genomes]
rs12538769	0.82[EUR][1000 genomes]
rs12538848	0.82[EUR][1000 genomes]
rs12540475	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12705405	0.81[CEU][hapmap];0.89[AMR][1000 genomes]
rs1548523	0.86[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1548524	0.86[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs17349904	1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs17350182	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17427123	0.96[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17427158	0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17427849	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17428071	1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17428126	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17428504	0.80[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17429118	0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17429146	0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1981696	0.84[CEU][hapmap];0.86[GIH][hapmap];0.93[MEX][hapmap];0.87[TSI][hapmap];0.89[AMR][1000 genomes]
rs1989814	0.92[ASN][1000 genomes]
rs2107318	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2107319	0.80[ASW][hapmap];1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2189501	0.86[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2249043	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.84[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2299422	0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2395859	0.93[ASN][1000 genomes]
rs257371	0.89[AMR][1000 genomes]
rs257372	0.89[AMR][1000 genomes]
rs257373	0.89[AMR][1000 genomes]
rs257375	0.92[GIH][hapmap];0.87[TSI][hapmap];0.89[AMR][1000 genomes]
rs257377	0.84[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];0.89[TSI][hapmap];0.89[AMR][1000 genomes]
rs257378	0.84[CEU][hapmap];0.91[AMR][1000 genomes]
rs257379	0.83[AMR][1000 genomes]
rs257381	0.89[AMR][1000 genomes]
rs257382	0.89[AMR][1000 genomes]
rs257385	0.91[AMR][1000 genomes]
rs257386	0.91[AMR][1000 genomes]
rs257387	0.84[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];0.92[TSI][hapmap];0.89[AMR][1000 genomes]
rs2894459	1.00[CEU][hapmap];0.88[CHB][hapmap];1.00[JPT][hapmap];0.97[TSI][hapmap];0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3729876	0.84[CEU][hapmap];0.96[GIH][hapmap];1.00[MEX][hapmap];0.89[TSI][hapmap];0.91[AMR][1000 genomes]
rs3729877	0.84[CEU][hapmap];0.96[GIH][hapmap];0.93[MEX][hapmap];0.89[TSI][hapmap];0.89[AMR][1000 genomes]
rs3757713	0.92[ASN][1000 genomes]
rs3779498	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3779500	0.84[CEU][hapmap];0.93[GIH][hapmap];0.93[MEX][hapmap];0.89[TSI][hapmap];0.89[AMR][1000 genomes]
rs3801958	0.83[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs3801959	0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3801963	1.00[CEU][hapmap];0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3801965	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3815148	0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3823959	0.93[ASN][1000 genomes]
rs3823960	0.93[ASN][1000 genomes]
rs4727670	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4727671	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4730222	0.91[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs4730223	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.93[MEX][hapmap];0.97[TSI][hapmap];0.93[AMR][1000 genomes];0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4730224	0.96[AMR][1000 genomes];0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4730226	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4730227	0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4730228	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4730229	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4730231	0.86[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4730232	0.86[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4730233	0.82[EUR][1000 genomes]
rs57525841	0.81[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs58319984	0.83[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs58663672	0.86[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs59900773	0.82[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs60255281	0.83[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs61014091	0.83[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs61406169	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs61511581	0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs61673847	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6466160	0.84[CEU][hapmap];0.89[AMR][1000 genomes]
rs6466162	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6946036	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];0.86[MEX][hapmap];1.00[TSI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6946931	0.84[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];0.92[TSI][hapmap];0.91[AMR][1000 genomes]
rs6947675	1.00[CEU][hapmap];0.96[AMR][1000 genomes];0.87[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6947857	0.84[CEU][hapmap];0.91[AMR][1000 genomes]
rs6949961	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6951639	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6960148	0.84[CEU][hapmap];0.91[AMR][1000 genomes]
rs6960813	0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6963917	0.85[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6964798	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6964966	1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6965001	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6967638	0.85[EUR][1000 genomes]
rs6967639	0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6967745	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6971675	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6971774	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6977868	0.81[CEU][hapmap];0.91[AMR][1000 genomes]
rs7777976	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7779062	0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7781947	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7783181	0.82[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7783562	0.95[ASN][1000 genomes]
rs7789500	0.92[ASN][1000 genomes]
rs7789678	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7793594	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7794598	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap]
rs7794915	0.93[CHB][hapmap];1.00[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.87[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs7794965	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7798223	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7800443	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7803290	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7807648	0.83[EUR][1000 genomes]
rs7981	0.94[CEU][hapmap];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9641378	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs997311	0.85[EUR][1000 genomes];0.97[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831087	chr7:106673465-106872460	Active TSS Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
2	esv3383027	chr7:106802625-107096474	Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases

mRNA abundance (count:7)

SNP	Gene	Cis/trans	Tissue	Source
rs2023892	NRCAM	cis	parietal	SCAN
rs2023892	GPR22	Cis_1M	lymphoblastoid	RTeQTL
rs2023892	GPR22	cis	multi-tissue	Pritchard
rs2023892	ZNF284	trans	cerebellum	SCAN
rs2023892	LHFPL3	cis	parietal	SCAN
rs2023892	ATXN7L1	cis	parietal	SCAN
rs2023892	BCAP29	cis	parietal	SCAN

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:106815200-106849400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
2	chr7:106817400-106851400	Strong transcription	Primary B cells from peripheral blood	blood
3	chr7:106819600-106851800	Strong transcription	Primary monocytes fromperipheralblood	blood
4	chr7:106819800-106851600	Strong transcription	Dnd41	blood
5	chr7:106820000-106851200	Strong transcription	Primary neutrophils fromperipheralblood	blood
6	chr7:106820000-106851600	Strong transcription	Monocytes-CD14+_RO01746	blood
7	chr7:106820200-106848400	Strong transcription	Placenta	Placenta
8	chr7:106820200-106851200	Strong transcription	Primary B cells from cord blood	blood
9	chr7:106820200-106851800	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
10	chr7:106820200-106851800	Strong transcription	Fetal Thymus	thymus
11	chr7:106820400-106848200	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr7:106821000-106848400	Strong transcription	Liver	Liver
13	chr7:106821000-106854600	Strong transcription	Primary T cells from cord blood	blood
14	chr7:106821200-106851800	Strong transcription	Primary T cells fromperipheralblood	blood
15	chr7:106821200-106851800	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
16	chr7:106821200-106851800	Strong transcription	Rectal Mucosa Donor 29	rectum
17	chr7:106821400-106851800	Strong transcription	Duodenum Mucosa	Duodenum
18	chr7:106821600-106851600	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
19	chr7:106821600-106851800	Strong transcription	Primary T helper cells fromperipheralblood	blood
20	chr7:106821800-106847800	Strong transcription	Breast Myoepithelial Primary Cells	Breast
21	chr7:106821800-106851400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
22	chr7:106823000-106851200	Strong transcription	Primary T helper 17 cells PMA-I stimulated	--
23	chr7:106823800-106849600	Weak transcription	HMEC	breast
24	chr7:106828600-106849600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
25	chr7:106828600-106851800	Strong transcription	Fetal Intestine Large	intestine
26	chr7:106828800-106849800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
27	chr7:106828800-106851200	Strong transcription	Primary T helper cells PMA-I stimulated	--
28	chr7:106831400-106847800	Weak transcription	Fetal Brain Male	brain
29	chr7:106832000-106852400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
30	chr7:106832800-106847800	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
31	chr7:106833600-106849400	Weak transcription	Esophagus	oesophagus
32	chr7:106834200-106851600	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
33	chr7:106834800-106851000	Strong transcription	Thymus	Thymus
34	chr7:106835200-106851800	Strong transcription	Primary hematopoietic stem cells short term culture	blood
35	chr7:106835400-106852200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
36	chr7:106835600-106848000	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
37	chr7:106835800-106851000	Strong transcription	Primary T helper naive cells from peripheral blood	blood
38	chr7:106835800-106851600	Strong transcription	Fetal Muscle Leg	muscle
39	chr7:106836200-106852000	Strong transcription	Fetal Muscle Trunk	muscle
40	chr7:106836400-106848200	Strong transcription	Cortex derived primary cultured neurospheres	brain
41	chr7:106836400-106851200	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
42	chr7:106837000-106851000	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
43	chr7:106837200-106847800	Strong transcription	Primary hematopoietic stem cells	blood
44	chr7:106837800-106848000	Weak transcription	NHEK	skin
45	chr7:106838000-106847800	Weak transcription	Psoas Muscle	Psoas
46	chr7:106838200-106850600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
47	chr7:106838200-106865200	Weak transcription	Stomach Mucosa	stomach
48	chr7:106840000-106853400	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
49	chr7:106840800-106848400	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
50	chr7:106841000-106848000	Weak transcription	Muscle Satellite Cultured Cells	--

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links