The 2.0 version of rSNPBase

Variant report

Variant rs17428504
Chromosome Location chr7:106914944-106914945
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:106846000-106925800 Weak transcription Primary T killer naive cells fromperipheralblood blood
2 chr7:106851000-106946000 Weak transcription Esophagus oesophagus
3 chr7:106853400-106925600 Weak transcription Primary T killer memory cells from peripheral blood blood
4 chr7:106874000-106917800 Weak transcription Osteobl bone
5 chr7:106874000-106922600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
6 chr7:106874000-106929200 Weak transcription NH-A brain
7 chr7:106874000-106945600 Weak transcription Pancreas Pancrea
8 chr7:106883000-106918800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr7:106886400-106971400 Weak transcription Fetal Muscle Trunk muscle
10 chr7:106886800-106946000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr7:106887000-106935800 Weak transcription Small Intestine intestine
12 chr7:106888600-106926600 Weak transcription Ovary ovary
13 chr7:106888600-106930800 Weak transcription Primary hematopoietic stem cells short term culture blood
14 chr7:106888600-106931600 Weak transcription Dnd41 blood
15 chr7:106888800-106917400 Weak transcription HSMM muscle
16 chr7:106888800-106930800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr7:106888800-106932000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr7:106888800-106933400 Weak transcription Fetal Stomach stomach
19 chr7:106888800-106946000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr7:106888800-106946200 Weak transcription Rectal Mucosa Donor 31 rectum
21 chr7:106888800-106999400 Weak transcription Sigmoid Colon Sigmoid Colon
22 chr7:106889000-106933400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr7:106889000-106934400 Weak transcription Primary T regulatory cells fromperipheralblood blood
24 chr7:106889200-106922600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr7:106889600-106920400 Weak transcription Primary T helper cells PMA-I stimulated --
26 chr7:106890800-106921800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr7:106890800-106945600 Weak transcription Aorta Aorta
28 chr7:106891000-106923000 Weak transcription Primary B cells from peripheral blood blood
29 chr7:106891000-106931000 Weak transcription Primary hematopoietic stem cells blood
30 chr7:106892800-106918200 Weak transcription Gastric stomach
31 chr7:106893400-106922800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
32 chr7:106898600-106917600 Weak transcription Skeletal Muscle Male skeletal muscle
33 chr7:106898800-106927000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr7:106899200-106933600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
35 chr7:106903200-106921800 Weak transcription Primary T cells fromperipheralblood blood
36 chr7:106903200-106922800 Weak transcription Primary B cells from cord blood blood
37 chr7:106903800-106916200 Weak transcription Brain Substantia Nigra brain
38 chr7:106903800-106917800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
39 chr7:106903800-106924200 Weak transcription Brain Hippocampus Middle brain
40 chr7:106904800-106959800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
41 chr7:106905400-106922600 Weak transcription Duodenum Smooth Muscle Duodenum
42 chr7:106907000-106933600 Weak transcription Fetal Adrenal Gland Adrenal Gland
43 chr7:106908200-106933600 Weak transcription Primary T helper naive cells fromperipheralblood blood
44 chr7:106908400-106917800 Weak transcription Rectal Smooth Muscle rectum
45 chr7:106908600-106933000 Weak transcription Liver Liver
46 chr7:106909000-106932200 Weak transcription NHEK skin
47 chr7:106909000-106968600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
48 chr7:106910200-106915200 Weak transcription HepG2 liver
49 chr7:106910200-106946400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
50 chr7:106910600-106927400 Weak transcription Adipose Nuclei Adipose

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Last update: Aug 31, 2015