Variant report

Variant	rs6946036
Chromosome Location	chr7:106853659-106853660
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr7:106849228..106851031-chr7:106852339..106854731,2	MCF-7	breast:
2	chr7:106807878..106810234-chr7:106851655..106854013,2	K562	blood:
3	chr7:106827310..106829106-chr7:106852636..106856813,3	K562	blood:
4	chr7:106852681..106856465-chr7:106859214..106862560,3	K562	blood:

Variant related genes	Relation type
ENSG00000105856	Chromatin interaction

Extended variants
information (count: 158 )
Associated
traits (count: 7 )

rSNPs within LD-proxies of this variant (count:154)

rs_ID	r²[population]
rs1002935	0.95[CEU][hapmap];0.85[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1018946	1.00[ASW][hapmap];0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];0.86[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1018947	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10253172	0.91[AMR][1000 genomes]
rs10253291	0.83[AMR][1000 genomes]
rs10487271	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10953529	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10953530	0.95[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.86[MEX][hapmap];0.97[TSI][hapmap];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10953531	0.95[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];0.86[MEX][hapmap];0.97[TSI][hapmap];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10953533	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10953534	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10953535	1.00[AFR][1000 genomes];0.82[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10953537	1.00[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs1121312	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11761181	0.81[AFR][1000 genomes];0.84[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11762152	0.81[ASN][1000 genomes]
rs11764448	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11766060	0.87[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.94[ASN][1000 genomes]
rs11767623	0.89[AMR][1000 genomes]
rs11769527	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11769861	0.83[AFR][1000 genomes];0.82[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11769901	0.83[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11773514	0.81[AFR][1000 genomes];0.85[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12154285	0.82[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12531187	0.81[AFR][1000 genomes];0.81[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12532447	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12532849	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12532953	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12532967	0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12533516	0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12533767	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12534000	0.84[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12534676	0.81[AFR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12535081	0.82[EUR][1000 genomes]
rs12535258	0.95[CEU][hapmap];0.84[EUR][1000 genomes]
rs12535814	0.94[ASN][1000 genomes]
rs12536485	0.82[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12536491	0.97[ASN][1000 genomes]
rs12536574	0.81[AFR][1000 genomes];0.96[AMR][1000 genomes];0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12536603	0.97[ASN][1000 genomes]
rs12537011	1.00[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs12537374	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12537730	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12537733	0.83[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12538090	0.81[EUR][1000 genomes]
rs12538769	0.82[EUR][1000 genomes]
rs12538848	0.82[EUR][1000 genomes]
rs12540475	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12705405	0.89[AMR][1000 genomes]
rs1548523	0.81[AFR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1548524	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17349904	1.00[ASW][hapmap];0.95[CEU][hapmap];0.94[CHB][hapmap];1.00[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.84[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.81[AFR][1000 genomes];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs17350182	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17425839	1.00[LWK][hapmap]
rs17427123	0.96[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs17427158	0.81[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs17427849	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17428071	0.95[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17428126	0.89[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs17428504	0.80[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17429118	0.81[AFR][1000 genomes];0.84[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs17429146	0.84[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1981696	0.82[GIH][hapmap];0.86[MEX][hapmap];0.87[TSI][hapmap];0.89[AMR][1000 genomes]
rs1989814	1.00[AFR][1000 genomes];0.94[ASN][1000 genomes]
rs2023892	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2107318	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2107319	0.95[CEU][hapmap];0.94[CHB][hapmap];1.00[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];0.86[MEX][hapmap];1.00[TSI][hapmap];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2189501	0.86[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2249043	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];0.92[MEX][hapmap];1.00[TSI][hapmap];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2299422	0.84[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2395859	0.96[ASN][1000 genomes]
rs257371	0.89[AMR][1000 genomes]
rs257372	0.89[AMR][1000 genomes]
rs257373	0.89[AMR][1000 genomes]
rs257375	0.89[GIH][hapmap];0.87[TSI][hapmap];0.89[AMR][1000 genomes]
rs257377	0.96[GIH][hapmap];0.86[MEX][hapmap];1.00[MKK][hapmap];0.89[TSI][hapmap];0.89[AMR][1000 genomes]
rs257378	0.91[AMR][1000 genomes]
rs257379	0.83[AMR][1000 genomes]
rs257381	0.89[AMR][1000 genomes]
rs257382	0.89[AMR][1000 genomes]
rs257385	0.91[AMR][1000 genomes]
rs257386	0.91[AMR][1000 genomes]
rs257387	0.96[GIH][hapmap];1.00[LWK][hapmap];0.86[MEX][hapmap];1.00[MKK][hapmap];0.92[TSI][hapmap];0.89[AMR][1000 genomes]
rs2894459	0.95[CEU][hapmap];0.88[CHB][hapmap];1.00[JPT][hapmap];1.00[MKK][hapmap];0.97[TSI][hapmap];0.84[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3729876	0.92[GIH][hapmap];0.86[MEX][hapmap];0.89[TSI][hapmap];0.91[AMR][1000 genomes]
rs3729877	0.92[GIH][hapmap];0.86[MEX][hapmap];0.89[TSI][hapmap];0.89[AMR][1000 genomes]
rs3757713	0.83[AFR][1000 genomes];0.94[ASN][1000 genomes]
rs3779498	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3779500	0.89[GIH][hapmap];0.92[MEX][hapmap];0.89[TSI][hapmap];0.89[AMR][1000 genomes]
rs3801958	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3801959	0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3801963	1.00[CEU][hapmap];0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3801965	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs3815148	0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3823959	1.00[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs3823960	1.00[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs4727670	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4727671	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4730222	0.91[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs4730223	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];0.86[MEX][hapmap];0.97[TSI][hapmap];0.93[AMR][1000 genomes];0.84[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4730224	0.96[AMR][1000 genomes];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4730226	0.81[AFR][1000 genomes];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4730227	0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4730228	0.81[AFR][1000 genomes];0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4730229	0.81[AFR][1000 genomes];0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4730231	0.86[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4730232	0.86[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4730233	0.82[EUR][1000 genomes]
rs57525841	0.81[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs58319984	0.83[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs58663672	0.86[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs59900773	0.82[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs60255281	0.83[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs61014091	0.83[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs61406169	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs61511581	0.86[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs61673847	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6466160	0.89[AMR][1000 genomes]
rs6466162	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6946931	0.96[GIH][hapmap];1.00[LWK][hapmap];0.86[MEX][hapmap];1.00[MKK][hapmap];0.92[TSI][hapmap];0.91[AMR][1000 genomes]
rs6947675	0.94[CEU][hapmap];0.96[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6947857	0.91[AMR][1000 genomes]
rs6949961	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.86[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6951639	0.81[AFR][1000 genomes];0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6960148	0.91[AMR][1000 genomes]
rs6960813	0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6963917	0.85[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6964798	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6964966	1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6965001	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6967638	0.85[EUR][1000 genomes]
rs6967639	0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6967745	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6971675	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6971774	1.00[ASW][hapmap];0.95[CEU][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6977868	0.91[AMR][1000 genomes]
rs7777976	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7779062	0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7781947	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AFR][1000 genomes];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7783181	0.82[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7783562	0.97[ASN][1000 genomes]
rs7789500	0.92[ASN][1000 genomes]
rs7789678	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7793594	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7794598	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];0.92[MEX][hapmap];0.97[TSI][hapmap]
rs7794915	0.93[CHB][hapmap];1.00[CHD][hapmap];0.88[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.86[MEX][hapmap];1.00[MKK][hapmap];0.87[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs7794965	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7798223	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7800443	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7803290	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7807648	0.83[EUR][1000 genomes]
rs7981	0.88[CEU][hapmap];0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9641378	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs997311	0.81[AFR][1000 genomes];0.85[EUR][1000 genomes];0.97[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831087	chr7:106673465-106872460	Active TSS Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
2	esv3383027	chr7:106802625-107096474	Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
3	nsv888939	chr7:106849393-107045700	ZNF genes & repeats Strong transcription Weak transcription Enhancers Active TSS Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region miRNA target site	8 gene(s)	inside rSNPs	diseases
4	esv2756226	chr7:106850755-106944563	Weak transcription Strong transcription Enhancers ZNF genes & repeats Genic enhancers Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases

mRNA abundance (count:7)

SNP	Gene	Cis/trans	Tissue	Source
rs6946036	ATXN7L1	cis	parietal	SCAN
rs6946036	GPR22	Cis_1M	lymphoblastoid	RTeQTL
rs6946036	LHFPL3	cis	parietal	SCAN
rs6946036	ZNF284	trans	cerebellum	SCAN
rs6946036	IMMP2L	cis	cerebellum	SCAN
rs6946036	BCAP29	cis	parietal	SCAN
rs6946036	NRCAM	cis	parietal	SCAN

Chromatin state (count:97 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:106821000-106854600	Strong transcription	Primary T cells from cord blood	blood
2	chr7:106838200-106865200	Weak transcription	Stomach Mucosa	stomach
3	chr7:106841600-106855000	Weak transcription	Pancreatic Islets	Pancreatic Islet
4	chr7:106844000-106870400	Weak transcription	Placenta Amnion	Placenta Amnion
5	chr7:106844200-106873200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
6	chr7:106844600-106853800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
7	chr7:106844600-106873600	Weak transcription	HUES6 Cell Line	embryonic stem cell
8	chr7:106844600-106880400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
9	chr7:106844600-106888400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
10	chr7:106846000-106925800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
11	chr7:106846200-106870600	Weak transcription	NH-A	brain
12	chr7:106846400-106862400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
13	chr7:106848800-106854000	Weak transcription	Fetal Brain Female	brain
14	chr7:106849000-106873200	Weak transcription	Brain Anterior Caudate	brain
15	chr7:106849200-106867800	Weak transcription	Brain Hippocampus Middle	brain
16	chr7:106849200-106872600	Weak transcription	HSMM	muscle
17	chr7:106849600-106853800	Weak transcription	Placenta	Placenta
18	chr7:106849800-106853800	Weak transcription	Psoas Muscle	Psoas
19	chr7:106850200-106853800	Weak transcription	NHLF	lung
20	chr7:106850400-106890000	Weak transcription	Hela-S3	cervix
21	chr7:106850600-106860600	Weak transcription	Skeletal Muscle Male	skeletal muscle
22	chr7:106850800-106854200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
23	chr7:106850800-106865400	Weak transcription	Fetal Lung	lung
24	chr7:106850800-106869000	Weak transcription	NHEK	skin
25	chr7:106850800-106871000	Weak transcription	HMEC	breast
26	chr7:106850800-106895200	Weak transcription	Colon Smooth Muscle	Colon
27	chr7:106851000-106853800	Weak transcription	Thymus	Thymus
28	chr7:106851000-106854200	Weak transcription	HSMMtube	muscle
29	chr7:106851000-106861000	Weak transcription	Skeletal Muscle Female	skeletal muscle
30	chr7:106851000-106864600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
31	chr7:106851000-106864800	Weak transcription	Aorta	Aorta
32	chr7:106851000-106865000	Weak transcription	Sigmoid Colon	Sigmoid Colon
33	chr7:106851000-106865000	Weak transcription	HepG2	liver
34	chr7:106851000-106865200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
35	chr7:106851000-106873600	Weak transcription	HUES64 Cell Line	embryonic stem cell
36	chr7:106851000-106897600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
37	chr7:106851000-106946000	Weak transcription	Esophagus	oesophagus
38	chr7:106851200-106853800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
39	chr7:106851200-106853800	Weak transcription	Primary neutrophils fromperipheralblood	blood
40	chr7:106851200-106854000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
41	chr7:106851200-106854000	Weak transcription	Primary T helper cells PMA-I stimulated	--
42	chr7:106851200-106863400	Weak transcription	Spleen	Spleen
43	chr7:106851200-106864600	Weak transcription	Stomach Smooth Muscle	stomach
44	chr7:106851200-106864800	Weak transcription	Liver	Liver
45	chr7:106851200-106864800	Weak transcription	Rectal Mucosa Donor 31	rectum
46	chr7:106851200-106865000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
47	chr7:106851200-106865400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
48	chr7:106851200-106866000	Weak transcription	Duodenum Smooth Muscle	Duodenum
49	chr7:106851200-106869200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
50	chr7:106851200-106869200	Weak transcription	Osteobl	bone

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links