The 2.0 version of rSNPBase

Variant report

Variant rs12537374
Chromosome Location chr7:106887680-106887681
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:106844600-106888400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
2 chr7:106846000-106925800 Weak transcription Primary T killer naive cells fromperipheralblood blood
3 chr7:106850400-106890000 Weak transcription Hela-S3 cervix
4 chr7:106850800-106895200 Weak transcription Colon Smooth Muscle Colon
5 chr7:106851000-106897600 Weak transcription Primary T helper naive cells from peripheral blood blood
6 chr7:106851000-106946000 Weak transcription Esophagus oesophagus
7 chr7:106851200-106888200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
8 chr7:106851200-106892400 Weak transcription Gastric stomach
9 chr7:106851200-106892600 Weak transcription Rectal Smooth Muscle rectum
10 chr7:106853400-106925600 Weak transcription Primary T killer memory cells from peripheral blood blood
11 chr7:106864000-106889600 Weak transcription Spleen Spleen
12 chr7:106865600-106888200 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr7:106865600-106890600 Weak transcription Aorta Aorta
14 chr7:106865600-106892400 Weak transcription HepG2 liver
15 chr7:106866600-106909600 Weak transcription Placenta Placenta
16 chr7:106867000-106888000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
17 chr7:106867800-106889800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
18 chr7:106871600-106889800 Weak transcription NHDF-Ad bronchial
19 chr7:106872000-106889800 Weak transcription Fetal Lung lung
20 chr7:106874000-106888200 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr7:106874000-106888200 Weak transcription Skeletal Muscle Female skeletal muscle
22 chr7:106874000-106890200 Weak transcription GM12878-XiMat blood
23 chr7:106874000-106917800 Weak transcription Osteobl bone
24 chr7:106874000-106922600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
25 chr7:106874000-106929200 Weak transcription NH-A brain
26 chr7:106874000-106945600 Weak transcription Pancreas Pancrea
27 chr7:106875000-106888200 Weak transcription Brain Inferior Temporal Lobe brain
28 chr7:106875000-106889200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
29 chr7:106875000-106890600 Weak transcription H1 Cell Line embryonic stem cell
30 chr7:106875400-106908000 Weak transcription HMEC breast
31 chr7:106875600-106898400 Weak transcription HUVEC blood vessel
32 chr7:106876600-106890000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
33 chr7:106877800-106888000 Weak transcription HSMM muscle
34 chr7:106878200-106888200 Weak transcription Primary T helper cells PMA-I stimulated --
35 chr7:106878800-106895000 Weak transcription K562 blood
36 chr7:106881200-106895600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
37 chr7:106882400-106890000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
38 chr7:106882600-106889200 Strong transcription Monocytes-CD14+_RO01746 blood
39 chr7:106883000-106918800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
40 chr7:106883400-106910200 Weak transcription Lung lung
41 chr7:106883400-106911400 Weak transcription Right Ventricle heart
42 chr7:106883600-106894200 Weak transcription Fetal Heart heart
43 chr7:106884000-106888800 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
44 chr7:106884200-106889800 Weak transcription A549 lung
45 chr7:106884200-106890600 Weak transcription Stomach Mucosa stomach
46 chr7:106884600-106887800 ZNF genes & repeats Primary hematopoietic stem cells blood
47 chr7:106884600-106888800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr7:106884600-106889200 Strong transcription Liver Liver
49 chr7:106884800-106888600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr7:106884800-106889000 Strong transcription Duodenum Smooth Muscle Duodenum

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Last update: Aug 31, 2015