Variant report

Variant	rs257387
Chromosome Location	chr7:106808480-106808481
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	REST	chr7:106807838-106809131	A549	lung:	n/a	chr7:106807992-106808001
2	EP300	chr7:106808150-106809190	GM12878	blood:	n/a	n/a
3	POLR2A	chr7:106807915-106809689	PBDE	blood:	n/a	n/a
4	POLR2A	chr7:106808458-106809222	HL-60	blood:	n/a	n/a
5	RFX5	chr7:106807903-106809597	Hela-S3	cervix:	n/a	n/a
6	POLR2A	chr7:106808386-106809801	HCT-116	colon:	n/a	n/a
7	HDAC2	chr7:106808413-106809140	K562	blood:	n/a	n/a
8	ETS1	chr7:106808318-106809786	K562	blood:	n/a	chr7:106808997-106809008 chr7:106808516-106808527 chr7:106809100-106809113 chr7:106808513-106808524
9	SP1	chr7:106807901-106809906	HCT-116	colon:	n/a	chr7:106808568-106808582 chr7:106809392-106809404 chr7:106809393-106809402 chr7:106809422-106809431 chr7:106808516-106808525 chr7:106808997-106809006 chr7:106809329-106809350 chr7:106809369-106809390 chr7:106809418-106809432 chr7:106808515-106808525 chr7:106809650-106809664 chr7:106808514-106808526 chr7:106808510-106808519 chr7:106809394-106809403 chr7:106808996-106809010 chr7:106808515-106808524 chr7:106809302-106809311 chr7:106809660-106809669 chr7:106809392-106809404 chr7:106808514-106808526 chr7:106809666-106809680
10	HEY1	chr7:106808025-106809156	HepG2	liver:	n/a	n/a
11	RCOR1	chr7:106808226-106809626	K562	blood:	n/a	n/a
12	POLR2A	chr7:106807968-106809030	HUVEC	blood vessel:	n/a	n/a
13	CHD2	chr7:106808129-106810620	Hela-S3	cervix:	n/a	n/a
14	ZNF143	chr7:106808111-106809707	H1-hESC	embryonic stem cell:	n/a	chr7:106809169-106809184 chr7:106809093-106809111
15	SIN3AK20	chr7:106807890-106810897	MCF-7	breast:	n/a	n/a
16	YY1	chr7:106807509-106810741	SK-N-SH	brain:	n/a	chr7:106808513-106808522 chr7:106808516-106808525 chr7:106808212-106808224 chr7:106808513-106808524 chr7:106808215-106808224 chr7:106808510-106808524
17	POLR2A	chr7:106808420-106810765	GM12878	blood:	n/a	n/a
18	UBTF	chr7:106808138-106809092	K562	blood:	n/a	n/a
19	HCFC1	chr7:106807850-106810896	Hela-S3	cervix:	n/a	n/a
20	SMARCB1	chr7:106808395-106810720	Hela-S3	cervix:	n/a	n/a
21	TBL1XR1	chr7:106808165-106809752	K562	blood:	n/a	n/a
22	POLR2A	chr7:106808131-106811006	HepG2	liver:	n/a	n/a
23	TFAP2C	chr7:106808460-106810486	Hela-S3	cervix:	n/a	chr7:106810138-106810153 chr7:106809403-106809418
24	NFIC	chr7:106808014-106809570	GM12878	blood:	n/a	chr7:106808853-106808869 chr7:106808852-106808869
25	MAZ	chr7:106808092-106810621	K562	blood:	n/a	chr7:106808574-106808584
26	TBL1XR1	chr7:106807951-106809478	K562	blood:	n/a	n/a
27	TAF1	chr7:106808434-106809788	SK-N-SH	brain:	n/a	n/a
28	EGR1	chr7:106808059-106810610	K562	blood:	n/a	chr7:106808511-106808524 chr7:106808511-106808521 chr7:106808517-106808530 chr7:106808516-106808530 chr7:106808517-106808530 chr7:106809655-106809668 chr7:106808511-106808524 chr7:106808510-106808525 chr7:106808515-106808525 chr7:106808763-106808787 chr7:106809302-106809312 chr7:106808518-106808527 chr7:106808517-106808530 chr7:106810188-106810197 chr7:106809088-106809112 chr7:106809392-106809402 chr7:106808517-106808530 chr7:106808511-106808524 chr7:106809682-106809692 chr7:106809121-106809131 chr7:106808512-106808521 chr7:106808518-106808528 chr7:106808995-106809009 chr7:106808999-106809009 chr7:106808518-106808529 chr7:106808997-106809012 chr7:106808511-106808524 chr7:106808512-106808534 chr7:106808514-106808528 chr7:106808998-106809011 chr7:106808510-106808524 chr7:106808517-106808527 chr7:106810080-106810090 chr7:106808998-106809011 chr7:106809750-106809763
29	EGR1	chr7:106808129-106809863	MCF-7	breast:	n/a	chr7:106808511-106808524 chr7:106808511-106808521 chr7:106808517-106808530 chr7:106808516-106808530 chr7:106808517-106808530 chr7:106809655-106809668 chr7:106808511-106808524 chr7:106808510-106808525 chr7:106808515-106808525 chr7:106808763-106808787 chr7:106809302-106809312 chr7:106808518-106808527 chr7:106808517-106808530 chr7:106809088-106809112 chr7:106809392-106809402 chr7:106808517-106808530 chr7:106808511-106808524 chr7:106809682-106809692 chr7:106809121-106809131 chr7:106808512-106808521 chr7:106808518-106808528 chr7:106808995-106809009 chr7:106808999-106809009 chr7:106808518-106808529 chr7:106808997-106809012 chr7:106808511-106808524 chr7:106808512-106808534 chr7:106808514-106808528 chr7:106808998-106809011 chr7:106808510-106808524 chr7:106808517-106808527 chr7:106808998-106809011 chr7:106809750-106809763
30	TBP	chr7:106808017-106810672	H1-hESC	embryonic stem cell:	n/a	n/a
31	TAF1	chr7:106807983-106809166	PFSK-1	brain:	n/a	n/a
32	POLR2A	chr7:106808050-106810658	Hela-S3	cervix:	n/a	n/a
33	FOS	chr7:106808059-106809281	HUVEC	blood vessel:	n/a	chr7:106808262-106808270 chr7:106808259-106808267 chr7:106808260-106808271 chr7:106808369-106808377
34	GABPA	chr7:106808322-106809821	MCF-7	breast:	n/a	chr7:106808516-106808525
35	NR2F2	chr7:106808064-106809635	K562	blood:	n/a	n/a
36	MAX	chr7:106808061-106810703	NB4	blood:	n/a	chr7:106808574-106808584
37	POLR2A	chr7:106807663-106811034	MCF10A-Er-Src	breast:	n/a	n/a
38	SMC3	chr7:106808111-106808600	K562	blood:	n/a	n/a
39	RUNX3	chr7:106808376-106809676	GM12878	blood:	n/a	n/a
40	EBF1	chr7:106808367-106809645	GM12878	blood:	n/a	chr7:106809406-106809417
41	ATF3	chr7:106807905-106809468	K562	blood:	n/a	chr7:106808415-106808423 chr7:106808516-106808525 chr7:106809302-106809311 chr7:106808510-106808519
42	SP1	chr7:106808341-106810734	A549	lung:	n/a	chr7:106808568-106808582 chr7:106809392-106809404 chr7:106809393-106809402 chr7:106809422-106809431 chr7:106808516-106808525 chr7:106808997-106809006 chr7:106809329-106809350 chr7:106809369-106809390 chr7:106809418-106809432 chr7:106808515-106808525 chr7:106809650-106809664 chr7:106808514-106808526 chr7:106808510-106808519 chr7:106809394-106809403 chr7:106808996-106809010 chr7:106808515-106808524 chr7:106809302-106809311 chr7:106809660-106809669 chr7:106809392-106809404 chr7:106808514-106808526 chr7:106810260-106810271 chr7:106809666-106809680
43	POLR2A	chr7:106807938-106809171	SK-N-MC	brain:	n/a	n/a
44	NFIC	chr7:106808075-106809705	ECC-1	luminal epithelium:	n/a	chr7:106808853-106808869 chr7:106808852-106808869
45	TAF1	chr7:106808402-106809194	H1-hESC	embryonic stem cell:	n/a	n/a
46	MAFK	chr7:106808127-106809117	HepG2	liver:	n/a	chr7:106808260-106808270
47	MAFK	chr7:106807827-106809525	Hela-S3	cervix:	n/a	chr7:106808260-106808270
48	POLR2A	chr7:106808476-106810651	GM15510	blood:	n/a	n/a
49	CTCF	chr7:106808051-106808804	K562	blood:	n/a	n/a
50	POLR2A	chr7:106808083-106810700	H1-neurons	neurons:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr7:105925907..105927516-chr7:106807822..106809694,2	MCF-7	breast:
2	chr7:106591850..106595766-chr7:106806509..106808675,4	K562	blood:
3	chr7:106807584..106809378-chr7:106851655..106853238,2	K562	blood:
4	chr7:106787797..106788658-chr7:106807825..106808493,2	MCF-7	breast:
5	chr7:106682746..106686911-chr7:106807556..106811745,9	K562	blood:
6	chr7:106587044..106590672-chr7:106806142..106809067,3	K562	blood:
7	chr7:106413235..106416729-chr7:106808294..106812162,5	K562	blood:
8	chr7:106412910..106417257-chr7:106805514..106810432,10	K562	blood:
9	chr7:106806268..106809018-chr7:106828300..106829930,2	MCF-7	breast:
10	chr4:6911309..6912262-chr7:106808315..106809159,2	Hela-S3	cervix:
11	chr7:106418119..106420518-chr7:106807575..106809396,2	K562	blood:
12	chr7:106806204..106812770-chr7:106813358..106822449,17	MCF-7	breast:
13	chr7:106808400..106812418-chr7:106824330..106827302,6	K562	blood:
14	chr7:106645322..106647719-chr7:106805775..106808975,3	K562	blood:
15	chr7:106417984..106420983-chr7:106808431..106810561,2	K562	blood:
16	chr7:106408124..106411629-chr7:106805648..106808816,3	K562	blood:
17	chr7:106808413..106811737-chr7:107382761..107387306,8	K562	blood:
18	chr7:106806529..106812770-chr7:107382455..107386610,12	K562	blood:
19	chr7:106297795..106302661-chr7:106807374..106810787,5	K562	blood:
20	chr7:106709319..106710970-chr7:106808182..106809916,2	K562	blood:
21	chr7:106682031..106689663-chr7:106807150..106811711,11	K562	blood:
22	chr7:106806710..106808917-chr7:107066397..107068811,2	K562	blood:

Variant related genes	Relation type
HBP1	TF binding region
ENSG00000132405	Chromatin interaction
ENSG00000243797	Chromatin interaction
ENSG00000273320	Chromatin interaction
ENSG00000105835	Chromatin interaction
ENSG00000105879	Chromatin interaction
ENSG00000228742	Chromatin interaction
ENSG00000005249	Chromatin interaction
ENSG00000105856	Chromatin interaction
ENSG00000177820	Chromatin interaction
ENSG00000241764	Chromatin interaction
ENSG00000253276	Chromatin interaction

Extended variants
information (count: 101 )
Associated
traits (count: 5 )

rSNPs within LD-proxies of this variant (count:99)

rs_ID	r²[population]
rs1002935	0.84[CEU][hapmap];0.89[AMR][1000 genomes]
rs1018946	0.84[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.92[TSI][hapmap];0.89[AMR][1000 genomes]
rs1018947	0.84[CEU][hapmap];0.89[AMR][1000 genomes]
rs10248105	1.00[JPT][hapmap]
rs10253172	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10253291	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10261881	0.81[ASN][1000 genomes]
rs10272371	1.00[CHD][hapmap]
rs10487271	0.84[CEU][hapmap]
rs10953529	0.83[AMR][1000 genomes]
rs10953530	0.84[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];0.89[TSI][hapmap];0.89[AMR][1000 genomes]
rs10953531	0.84[CEU][hapmap];0.96[GIH][hapmap];1.00[MEX][hapmap];0.89[TSI][hapmap];0.89[AMR][1000 genomes]
rs11509187	0.81[ASN][1000 genomes]
rs11766060	1.00[LWK][hapmap]
rs11767623	0.93[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12055946	0.81[ASN][1000 genomes]
rs12532447	0.89[CEU][hapmap]
rs12532849	0.84[CEU][hapmap]
rs12532953	0.89[AMR][1000 genomes]
rs12533767	0.89[AMR][1000 genomes]
rs12535258	0.84[CEU][hapmap]
rs12536574	0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12537374	0.80[AMR][1000 genomes]
rs12537730	0.89[AMR][1000 genomes]
rs12540475	0.80[AMR][1000 genomes]
rs12705405	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12705406	0.89[AFR][1000 genomes]
rs17153823	1.00[CHD][hapmap]
rs17153861	0.81[ASN][1000 genomes]
rs17340577	1.00[ASW][hapmap]
rs17341680	0.81[ASN][1000 genomes]
rs17349904	0.84[CEU][hapmap];0.96[GIH][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.92[TSI][hapmap];0.80[AMR][1000 genomes]
rs17424561	1.00[ASW][hapmap]
rs17425839	1.00[ASW][hapmap];1.00[CHD][hapmap];1.00[LWK][hapmap]
rs17427123	0.89[AMR][1000 genomes]
rs17427158	0.90[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs17427849	0.89[AMR][1000 genomes]
rs17428071	0.84[CEU][hapmap];0.80[AMR][1000 genomes]
rs17428126	0.80[AMR][1000 genomes]
rs1981696	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.86[GIH][hapmap];0.93[MEX][hapmap];0.95[TSI][hapmap];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2023892	0.89[AMR][1000 genomes]
rs2107318	0.89[AMR][1000 genomes]
rs2107319	0.84[CEU][hapmap];0.96[GIH][hapmap];1.00[MEX][hapmap];0.92[TSI][hapmap];0.83[AMR][1000 genomes]
rs2191917	0.81[ASN][1000 genomes]
rs2249043	0.84[CEU][hapmap];0.96[GIH][hapmap];1.00[MEX][hapmap];0.92[TSI][hapmap]
rs2250121	1.00[CHD][hapmap]
rs257371	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs257372	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs257373	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs257375	0.93[CEU][hapmap];0.89[CHB][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];0.95[TSI][hapmap];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs257377	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.97[TSI][hapmap];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs257378	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs257379	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs257381	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs257382	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs257385	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs257386	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28610544	0.81[ASN][1000 genomes]
rs2894459	0.84[CEU][hapmap];1.00[MKK][hapmap];0.90[TSI][hapmap]
rs3729876	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3729877	1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];0.93[MEX][hapmap];0.97[TSI][hapmap];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3752645	1.00[CHD][hapmap];0.81[ASN][1000 genomes]
rs3779500	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];0.93[MEX][hapmap];0.97[TSI][hapmap];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3801963	0.83[CEU][hapmap]
rs3801965	0.84[CEU][hapmap];0.90[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs4727671	0.80[AMR][1000 genomes]
rs4730222	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4730223	0.84[CEU][hapmap];1.00[GIH][hapmap];0.93[MEX][hapmap];0.90[TSI][hapmap];0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4730224	0.89[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs4730226	0.80[AMR][1000 genomes]
rs61014091	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61673847	0.80[AMR][1000 genomes]
rs6466160	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6946036	0.96[GIH][hapmap];1.00[LWK][hapmap];0.86[MEX][hapmap];1.00[MKK][hapmap];0.92[TSI][hapmap];0.89[AMR][1000 genomes]
rs6946931	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6947675	0.82[CEU][hapmap];0.89[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs6947857	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6949961	0.84[CEU][hapmap];0.96[GIH][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.92[TSI][hapmap];0.89[AMR][1000 genomes]
rs6951639	0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs6960148	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6960708	1.00[CHD][hapmap];0.81[ASN][1000 genomes]
rs6967745	0.84[CEU][hapmap];0.89[AMR][1000 genomes]
rs6971393	0.81[ASN][1000 genomes]
rs6971675	0.84[CEU][hapmap];0.89[AMR][1000 genomes]
rs6971774	1.00[ASW][hapmap];0.84[CEU][hapmap];1.00[GIH][hapmap];0.87[AMR][1000 genomes]
rs6977868	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AFR][1000 genomes];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6978486	0.81[ASN][1000 genomes]
rs7777976	0.80[AMR][1000 genomes]
rs7781947	0.84[CEU][hapmap]
rs7786692	1.00[CHD][hapmap]
rs7789678	0.82[AMR][1000 genomes]
rs7793594	0.80[AMR][1000 genomes]
rs7794598	0.84[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];0.89[TSI][hapmap]
rs7794915	0.92[GIH][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap]
rs7794965	0.82[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];0.89[TSI][hapmap];0.89[AMR][1000 genomes]
rs7798223	0.89[AMR][1000 genomes]
rs7981	0.81[CEU][hapmap];0.89[AMR][1000 genomes]
rs8180787	0.81[ASN][1000 genomes]
rs9641378	0.84[CEU][hapmap];0.83[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831087	chr7:106673465-106872460	Active TSS Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
2	esv3383027	chr7:106802625-107096474	Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases

mRNA abundance (count:5)

SNP	Gene	Cis/trans	Tissue	Source
rs257387	NRCAM	cis	parietal	SCAN
rs257387	TAS2R30	trans	lymphoblastoid	seeQTL
rs257387	ATXN7L1	cis	parietal	SCAN
rs257387	GPR22	Cis_1M	lymphoblastoid	RTeQTL
rs257387	BCAP29	cis	parietal	SCAN

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:106807000-106811400	Active TSS	NHLF	lung
2	chr7:106807200-106811000	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr7:106807200-106811000	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr7:106807400-106810600	Active TSS	Cortex derived primary cultured neurospheres	brain
5	chr7:106807400-106810600	Active TSS	NHEK	skin
6	chr7:106807400-106811000	Active TSS	A549	lung
7	chr7:106807400-106811200	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
8	chr7:106807400-106811200	Active TSS	Fetal Intestine Large	intestine
9	chr7:106807400-106811400	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
10	chr7:106807600-106808600	Active TSS	Adipose Nuclei	Adipose
11	chr7:106807600-106809000	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
12	chr7:106807600-106809000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
13	chr7:106807600-106810400	Active TSS	Fetal Lung	lung
14	chr7:106807600-106810600	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
15	chr7:106807600-106810600	Active TSS	Liver	Liver
16	chr7:106807600-106810600	Active TSS	Duodenum Mucosa	Duodenum
17	chr7:106807600-106810600	Active TSS	Rectal Mucosa Donor 29	rectum
18	chr7:106807600-106810800	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
19	chr7:106807600-106810800	Active TSS	Brain Anterior Caudate	brain
20	chr7:106807600-106810800	Active TSS	Fetal Adrenal Gland	Adrenal Gland
21	chr7:106807600-106810800	Active TSS	Pancreatic Islets	Pancreatic Islet
22	chr7:106807600-106810800	Active TSS	Fetal Muscle Leg	muscle
23	chr7:106807600-106810800	Active TSS	Fetal Stomach	stomach
24	chr7:106807600-106810800	Active TSS	Hela-S3	cervix
25	chr7:106807600-106811000	Active TSS	HMEC	breast
26	chr7:106807600-106811200	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
27	chr7:106807600-106811200	Active TSS	HUES6 Cell Line	embryonic stem cell
28	chr7:106807600-106811200	Active TSS	Fetal Kidney	kidney
29	chr7:106807600-106811200	Active TSS	Skeletal Muscle Female	skeletal muscle
30	chr7:106807600-106811400	Active TSS	ES-I3 Cell Line	embryonic stem cell
31	chr7:106807600-106811400	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
32	chr7:106807600-106811400	Active TSS	HUES48 Cell Line	embryonic stem cell
33	chr7:106807600-106811400	Active TSS	HUES64 Cell Line	embryonic stem cell
34	chr7:106807600-106811400	Active TSS	iPS-20b Cell Line	embryonic stem cell
35	chr7:106807600-106811400	Active TSS	Breast Myoepithelial Primary Cells	Breast
36	chr7:106807600-106811400	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
37	chr7:106807600-106811400	Active TSS	NHDF-Ad	bronchial
38	chr7:106807600-106812000	Active TSS	K562	blood
39	chr7:106807800-106808600	Active TSS	Primary T cells fromperipheralblood	blood
40	chr7:106807800-106808600	Active TSS	Primary T helper 17 cells PMA-I stimulated	--
41	chr7:106807800-106808600	Active TSS	Primary Natural Killer cells fromperipheralblood	blood
42	chr7:106807800-106808600	Active TSS	Muscle Satellite Cultured Cells	--
43	chr7:106807800-106808600	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
44	chr7:106807800-106808600	Active TSS	Stomach Smooth Muscle	stomach
45	chr7:106807800-106809000	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
46	chr7:106807800-106809000	Flanking Active TSS	Primary mononuclear cells fromperipheralblood	Blood
47	chr7:106807800-106809200	Active TSS	Right Atrium	heart
48	chr7:106807800-106809600	Active TSS	Fetal Heart	heart
49	chr7:106807800-106810600	Active TSS	Primary T killer memory cells from peripheral blood	blood
50	chr7:106807800-106810600	Active TSS	Brain Inferior Temporal Lobe	brain

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