The 2.0 version of rSNPBase

Variant report

Variant rs12532447
Chromosome Location chr7:106940476-106940477
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:106851000-106946000 Weak transcription Esophagus oesophagus
2 chr7:106874000-106945600 Weak transcription Pancreas Pancrea
3 chr7:106886400-106971400 Weak transcription Fetal Muscle Trunk muscle
4 chr7:106886800-106946000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr7:106888800-106946000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
6 chr7:106888800-106946200 Weak transcription Rectal Mucosa Donor 31 rectum
7 chr7:106888800-106999400 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr7:106890800-106945600 Weak transcription Aorta Aorta
9 chr7:106904800-106959800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
10 chr7:106909000-106968600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
11 chr7:106910200-106946400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr7:106911000-106964200 Weak transcription Duodenum Mucosa Duodenum
13 chr7:106911800-106946000 Weak transcription Fetal Intestine Small intestine
14 chr7:106915200-106953400 Weak transcription Left Ventricle heart
15 chr7:106918600-106963800 Weak transcription HSMM muscle
16 chr7:106921400-106946000 Weak transcription Fetal Thymus thymus
17 chr7:106923000-106965800 Weak transcription Duodenum Smooth Muscle Duodenum
18 chr7:106923800-106999400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
19 chr7:106925600-106959800 Weak transcription Primary T helper cells PMA-I stimulated --
20 chr7:106926800-106943000 Weak transcription Skeletal Muscle Male skeletal muscle
21 chr7:106928000-106942800 Weak transcription Fetal Heart heart
22 chr7:106928000-106958800 Weak transcription HepG2 liver
23 chr7:106928000-106972600 Weak transcription Fetal Muscle Leg muscle
24 chr7:106930800-106941400 Weak transcription Fetal Lung lung
25 chr7:106931200-106945000 Weak transcription Primary B cells from cord blood blood
26 chr7:106931400-106962800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr7:106931600-106945000 Weak transcription Skeletal Muscle Female skeletal muscle
28 chr7:106932200-106945600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
29 chr7:106932200-106946400 Weak transcription Brain Inferior Temporal Lobe brain
30 chr7:106932200-106967400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr7:106932400-106955600 Weak transcription Stomach Mucosa stomach
32 chr7:106932400-106956200 Weak transcription HMEC breast
33 chr7:106932600-106946000 Weak transcription NHEK skin
34 chr7:106932600-106953400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr7:106933000-106946000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr7:106934000-106942800 Weak transcription K562 blood
37 chr7:106934200-106945600 Weak transcription Fetal Intestine Large intestine
38 chr7:106934200-106945800 Weak transcription Breast Myoepithelial Primary Cells Breast
39 chr7:106934200-106945800 Weak transcription Rectal Mucosa Donor 29 rectum
40 chr7:106934200-106946000 Weak transcription Primary monocytes fromperipheralblood blood
41 chr7:106934200-106946000 Weak transcription Liver Liver
42 chr7:106934200-106947400 Weak transcription Rectal Smooth Muscle rectum
43 chr7:106934200-106967400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr7:106934200-106968600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr7:106934200-106971600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
46 chr7:106934200-106973000 Weak transcription Adipose Nuclei Adipose
47 chr7:106934400-106943000 Weak transcription Primary T cells from cord blood blood
48 chr7:106934400-106945600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr7:106934400-106946000 Weak transcription Primary hematopoietic stem cells short term culture blood
50 chr7:106934400-106967200 Weak transcription Fetal Stomach stomach

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Last update: Aug 31, 2015