The 2.0 version of rSNPBase

Variant report

Variant rs35486093
Chromosome Location chr1:85729820-85729821
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:85725400-85732200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr1:85725400-85732200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr1:85725400-85733200 Weak transcription Placenta Amnion Placenta Amnion
4 chr1:85725400-85734600 Weak transcription Small Intestine intestine
5 chr1:85725400-85741000 Weak transcription ES-WA7 Cell Line embryonic stem cell
6 chr1:85725600-85732200 Weak transcription Thymus Thymus
7 chr1:85725600-85734600 Weak transcription Lung lung
8 chr1:85725600-85737000 Weak transcription Primary T killer naive cells fromperipheralblood blood
9 chr1:85725800-85730000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
10 chr1:85725800-85730000 Weak transcription Fetal Adrenal Gland Adrenal Gland
11 chr1:85725800-85731600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr1:85725800-85731600 Weak transcription Primary T helper naive cells fromperipheralblood blood
13 chr1:85725800-85731800 Weak transcription Primary T helper naive cells from peripheral blood blood
14 chr1:85725800-85731800 Weak transcription Primary T regulatory cells fromperipheralblood blood
15 chr1:85725800-85732200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
16 chr1:85725800-85732200 Weak transcription Colonic Mucosa Colon
17 chr1:85725800-85732800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
18 chr1:85725800-85733800 Weak transcription Brain Germinal Matrix brain
19 chr1:85725800-85734600 Weak transcription H9 Cell Line embryonic stem cell
20 chr1:85725800-85734600 Weak transcription Esophagus oesophagus
21 chr1:85725800-85734800 Weak transcription Primary T killer memory cells from peripheral blood blood
22 chr1:85725800-85739400 Weak transcription Aorta Aorta
23 chr1:85726000-85730000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
24 chr1:85726000-85730000 Weak transcription Breast Myoepithelial Primary Cells Breast
25 chr1:85726000-85730000 Weak transcription Primary neutrophils fromperipheralblood blood
26 chr1:85726000-85730000 Weak transcription Primary T helper cells fromperipheralblood blood
27 chr1:85726000-85730200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr1:85726000-85730200 Weak transcription Psoas Muscle Psoas
29 chr1:85726000-85731200 Weak transcription Rectal Mucosa Donor 31 rectum
30 chr1:85726000-85732200 Weak transcription Brain Hippocampus Middle brain
31 chr1:85726000-85732200 Weak transcription Colon Smooth Muscle Colon
32 chr1:85726000-85732200 Weak transcription Fetal Kidney kidney
33 chr1:85726000-85732200 Weak transcription Rectal Smooth Muscle rectum
34 chr1:85726000-85732200 Weak transcription Skeletal Muscle Female skeletal muscle
35 chr1:85726000-85732200 Weak transcription Spleen Spleen
36 chr1:85726000-85732400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
37 chr1:85726000-85732600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
38 chr1:85726000-85732800 Weak transcription K562 blood
39 chr1:85726000-85733000 Weak transcription A549 lung
40 chr1:85726000-85734000 Weak transcription Brain Cingulate Gyrus brain
41 chr1:85726000-85734000 Weak transcription Ovary ovary
42 chr1:85726000-85734200 Weak transcription Brain Anterior Caudate brain
43 chr1:85726000-85734400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
44 chr1:85726000-85734400 Weak transcription Fetal Heart heart
45 chr1:85726000-85734400 Weak transcription HepG2 liver
46 chr1:85726000-85734600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
47 chr1:85726000-85734600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
48 chr1:85726000-85734600 Weak transcription Fetal Brain Male brain
49 chr1:85726000-85734600 Weak transcription Right Ventricle heart
50 chr1:85726000-85734800 Weak transcription Pancreatic Islets Pancreatic Islet

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Last update: Aug 31, 2015