Variant report

Variant	rs35542644
Chromosome Location	chr7:151059734-151059735
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr7:151058852..151060554-chr7:151062728..151064555,2	K562	blood:
2	chr7:151059594..151062068-chr7:151127886..151130411,2	MCF-7	breast:
3	chr7:151003449..151005383-chr7:151058947..151060647,2	K562	blood:

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs13221961	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.86[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs13226693	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1468510	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs35886370	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.86[EUR][1000 genomes];0.98[ASN][1000 genomes]

No data

Chromatin state (count:124 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:151039400-151069800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr7:151041600-151061200	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr7:151042600-151060400	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
4	chr7:151044600-151060800	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr7:151046800-151060000	Strong transcription	Fetal Lung	lung
6	chr7:151047400-151060000	Strong transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
7	chr7:151047400-151060000	Strong transcription	Foreskin Fibroblast Primary Cells skin01	Skin
8	chr7:151047400-151060200	Strong transcription	Fetal Stomach	stomach
9	chr7:151047400-151060800	Strong transcription	Fetal Muscle Trunk	muscle
10	chr7:151047400-151061000	Strong transcription	Fetal Muscle Leg	muscle
11	chr7:151047600-151060400	Strong transcription	Skeletal Muscle Female	skeletal muscle
12	chr7:151047800-151060600	Strong transcription	Fetal Intestine Large	intestine
13	chr7:151047800-151060600	Strong transcription	Stomach Smooth Muscle	stomach
14	chr7:151048000-151060000	Strong transcription	Left Ventricle	heart
15	chr7:151048000-151060000	Strong transcription	Lung	lung
16	chr7:151048000-151060400	Strong transcription	Fetal Brain Female	brain
17	chr7:151048200-151060600	Strong transcription	Liver	Liver
18	chr7:151048200-151060800	Strong transcription	Placenta	Placenta
19	chr7:151048200-151061000	Strong transcription	Sigmoid Colon	Sigmoid Colon
20	chr7:151048400-151060000	Strong transcription	Pancreas	Pancrea
21	chr7:151048800-151060000	Strong transcription	H1 Cell Line	embryonic stem cell
22	chr7:151048800-151060400	Strong transcription	Duodenum Mucosa	Duodenum
23	chr7:151049200-151072600	Weak transcription	Fetal Brain Male	brain
24	chr7:151049400-151060800	Strong transcription	Monocytes-CD14+_RO01746	blood
25	chr7:151049400-151063200	Weak transcription	Small Intestine	intestine
26	chr7:151049400-151077000	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
27	chr7:151049400-151078000	Weak transcription	Stomach Mucosa	stomach
28	chr7:151049800-151061000	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
29	chr7:151050000-151060600	Strong transcription	Primary B cells from peripheral blood	blood
30	chr7:151050200-151060200	Strong transcription	Primary monocytes fromperipheralblood	blood
31	chr7:151050200-151060600	Strong transcription	Primary neutrophils fromperipheralblood	blood
32	chr7:151050200-151060600	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
33	chr7:151050200-151060800	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
34	chr7:151050600-151061000	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
35	chr7:151050800-151060400	Strong transcription	Brain Cingulate Gyrus	brain
36	chr7:151051200-151069200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
37	chr7:151052200-151060400	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
38	chr7:151052200-151060600	Strong transcription	Primary T cells fromperipheralblood	blood
39	chr7:151052600-151060000	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
40	chr7:151053600-151062400	Weak transcription	NHLF	lung
41	chr7:151053600-151065200	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
42	chr7:151053600-151065200	Weak transcription	NHEK	skin
43	chr7:151053600-151065400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
44	chr7:151053600-151065400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
45	chr7:151053800-151073000	Weak transcription	Psoas Muscle	Psoas
46	chr7:151054000-151073200	Weak transcription	Pancreatic Islets	Pancreatic Islet
47	chr7:151054200-151071800	Weak transcription	H9 Cell Line	embryonic stem cell
48	chr7:151055200-151060000	Strong transcription	Aorta	Aorta
49	chr7:151055200-151060400	Strong transcription	Primary T helper naive cells from peripheral blood	blood
50	chr7:151055200-151061000	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

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