Variant report

Variant	rs13226693
Chromosome Location	chr7:151050614-151050615
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:151047952..151050836-chr7:151057197..151059669,2	K562	blood:

Variant related genes	Relation type
ENSG00000013374	Chromatin interaction

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs12703118	1.00[CEU][hapmap]
rs13221923	1.00[CEU][hapmap]
rs13221961	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1468510	1.00[CEU][hapmap];0.89[CHB][hapmap];1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs35542644	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs35886370	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6963048	0.84[CHB][hapmap]

No data

Chromatin state (count:125 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:151039400-151059000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr7:151039400-151069800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr7:151039800-151053000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
4	chr7:151040400-151057400	Weak transcription	Fetal Heart	heart
5	chr7:151040600-151059400	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr7:151041600-151061200	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
7	chr7:151042000-151055400	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr7:151042400-151055800	Strong transcription	HUES64 Cell Line	embryonic stem cell
9	chr7:151042600-151055800	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
10	chr7:151042600-151060400	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
11	chr7:151043600-151054000	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
12	chr7:151043600-151056000	Strong transcription	Osteobl	bone
13	chr7:151044600-151060800	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
14	chr7:151044800-151052000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
15	chr7:151044800-151052000	Weak transcription	Ovary	ovary
16	chr7:151045600-151054000	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
17	chr7:151045800-151054200	Strong transcription	HUVEC	blood vessel
18	chr7:151045800-151058200	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
19	chr7:151046000-151053800	Strong transcription	Muscle Satellite Cultured Cells	--
20	chr7:151046400-151053600	Strong transcription	NHLF	lung
21	chr7:151046400-151055800	Strong transcription	Cortex derived primary cultured neurospheres	brain
22	chr7:151046600-151051000	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
23	chr7:151046600-151054000	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
24	chr7:151046600-151054400	Strong transcription	Brain Germinal Matrix	brain
25	chr7:151046600-151055800	Strong transcription	Foreskin Fibroblast Primary Cells skin02	Skin
26	chr7:151046800-151060000	Strong transcription	Fetal Lung	lung
27	chr7:151047200-151051200	Strong transcription	Hela-S3	cervix
28	chr7:151047200-151055400	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
29	chr7:151047400-151055800	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
30	chr7:151047400-151055800	Strong transcription	Breast Myoepithelial Primary Cells	Breast
31	chr7:151047400-151057600	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
32	chr7:151047400-151060000	Strong transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
33	chr7:151047400-151060000	Strong transcription	Foreskin Fibroblast Primary Cells skin01	Skin
34	chr7:151047400-151060200	Strong transcription	Fetal Stomach	stomach
35	chr7:151047400-151060800	Strong transcription	Fetal Muscle Trunk	muscle
36	chr7:151047400-151061000	Strong transcription	Fetal Muscle Leg	muscle
37	chr7:151047600-151053600	Strong transcription	iPS-20b Cell Line	embryonic stem cell
38	chr7:151047600-151053800	Strong transcription	NH-A	brain
39	chr7:151047600-151054400	Strong transcription	Brain Dorsolateral Prefrontal Cortex	brain
40	chr7:151047600-151060400	Strong transcription	Skeletal Muscle Female	skeletal muscle
41	chr7:151047800-151053800	Strong transcription	HSMM	muscle
42	chr7:151047800-151055800	Strong transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
43	chr7:151047800-151055800	Strong transcription	HepG2	liver
44	chr7:151047800-151060600	Strong transcription	Fetal Intestine Large	intestine
45	chr7:151047800-151060600	Strong transcription	Stomach Smooth Muscle	stomach
46	chr7:151048000-151051400	Strong transcription	K562	blood
47	chr7:151048000-151053800	Strong transcription	Colonic Mucosa	Colon
48	chr7:151048000-151053800	Strong transcription	NHDF-Ad	bronchial
49	chr7:151048000-151054200	Strong transcription	Rectal Smooth Muscle	rectum
50	chr7:151048000-151055800	Strong transcription	Brain Anterior Caudate	brain

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