Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:81497006..81498618-chr3:81501090..81503352,2	K562	blood:
2	chr3:81499173..81502135-chr3:81503844..81505456,2	K562	blood:

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs12233618	0.94[AFR][1000 genomes];0.90[ASN][1000 genomes]
rs12633695	0.86[ASN][1000 genomes]
rs12634278	0.86[ASN][1000 genomes]
rs12637192	0.82[ASN][1000 genomes]
rs13082584	0.94[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs13082939	0.82[ASN][1000 genomes]
rs13087181	0.85[ASN][1000 genomes]
rs13088641	0.89[ASN][1000 genomes]
rs13100565	0.92[AFR][1000 genomes];0.87[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs1381302	0.86[ASN][1000 genomes]
rs17018940	0.85[ASN][1000 genomes]
rs17018945	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs17019039	0.86[ASN][1000 genomes]
rs17019042	0.85[ASN][1000 genomes]
rs34031239	0.86[ASN][1000 genomes]
rs34783916	0.94[AFR][1000 genomes];0.89[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs60231070	0.82[ASN][1000 genomes]
rs6783132	0.90[ASN][1000 genomes]
rs6785960	0.86[ASN][1000 genomes]
rs71326475	0.81[ASN][1000 genomes]
rs72902475	0.95[AFR][1000 genomes]
rs7642446	0.94[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs7650409	0.84[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv934018	chr3:81413060-81655338	Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Genic enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv933756	chr3:81413060-81754738	Weak transcription Strong transcription Enhancers Genic enhancers Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
3	nsv1003217	chr3:81435044-81752521	Weak transcription Strong transcription ZNF genes & repeats Enhancers Genic enhancers Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
4	nsv1012133	chr3:81499082-81817471	ZNF genes & repeats Enhancers Weak transcription Strong transcription Active TSS Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:81486800-81503200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr3:81493600-81503000	Weak transcription	Aorta	Aorta
3	chr3:81498200-81501600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr3:81498400-81502000	Enhancers	NHDF-Ad	bronchial
5	chr3:81500000-81501200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr3:81500000-81502000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr3:81500000-81502000	Enhancers	Osteobl	bone
8	chr3:81500200-81501200	Enhancers	HMEC	breast
9	chr3:81500200-81501600	Enhancers	Muscle Satellite Cultured Cells	--
10	chr3:81500200-81501800	Enhancers	NHLF	lung
11	chr3:81500400-81502000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
12	chr3:81500400-81502200	Enhancers	Fetal Heart	heart
13	chr3:81500800-81501800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
14	chr3:81501000-81501600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
15	chr3:81501000-81501600	Weak transcription	Adipose Nuclei	Adipose

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