The 2.0 version of rSNPBase

Variant report

Variant rs35571080
Chromosome Location chr1:224637790-224637791
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:90 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:224623200-224644400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:224623400-224638000 Weak transcription H9 Cell Line embryonic stem cell
3 chr1:224623400-224641000 Weak transcription Fetal Intestine Large intestine
4 chr1:224623400-224643000 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr1:224623400-224644600 Weak transcription Right Ventricle heart
6 chr1:224623600-224642200 Weak transcription Duodenum Mucosa Duodenum
7 chr1:224623600-224644600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
8 chr1:224623600-224644600 Weak transcription Brain Substantia Nigra brain
9 chr1:224623800-224644400 Weak transcription Brain Anterior Caudate brain
10 chr1:224624000-224642200 Weak transcription HUES48 Cell Line embryonic stem cell
11 chr1:224624000-224644000 Weak transcription Brain Hippocampus Middle brain
12 chr1:224624000-224644600 Weak transcription iPS-18 Cell Line embryonic stem cell
13 chr1:224624000-224644600 Weak transcription Brain Angular Gyrus brain
14 chr1:224624000-224645000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr1:224624000-224645000 Weak transcription Primary hematopoietic stem cells blood
16 chr1:224624000-224645000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
17 chr1:224624000-224646800 Weak transcription Primary B cells from peripheral blood blood
18 chr1:224624200-224642200 Weak transcription Primary hematopoietic stem cells short term culture blood
19 chr1:224624800-224637800 Weak transcription Dnd41 blood
20 chr1:224624800-224638200 Weak transcription Fetal Muscle Leg muscle
21 chr1:224624800-224641400 Weak transcription Fetal Intestine Small intestine
22 chr1:224624800-224644000 Weak transcription Pancreas Pancrea
23 chr1:224624800-224644400 Weak transcription A549 lung
24 chr1:224624800-224645000 Weak transcription Primary T killer memory cells from peripheral blood blood
25 chr1:224625200-224637800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
26 chr1:224625200-224644600 Weak transcription GM12878-XiMat blood
27 chr1:224625200-224645000 Weak transcription Primary T helper cells PMA-I stimulated --
28 chr1:224627000-224644000 Weak transcription Placenta Placenta
29 chr1:224627200-224641000 Weak transcription HepG2 liver
30 chr1:224627200-224642000 Weak transcription HUES64 Cell Line embryonic stem cell
31 chr1:224627200-224644400 Weak transcription ES-I3 Cell Line embryonic stem cell
32 chr1:224628200-224645000 Weak transcription Thymus Thymus
33 chr1:224628400-224641400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
34 chr1:224628400-224644600 Weak transcription Fetal Lung lung
35 chr1:224628400-224644800 Weak transcription Primary T helper cells fromperipheralblood blood
36 chr1:224628400-224648800 Weak transcription Fetal Brain Female brain
37 chr1:224628600-224644200 Weak transcription Fetal Adrenal Gland Adrenal Gland
38 chr1:224628600-224653600 Weak transcription Primary T regulatory cells fromperipheralblood blood
39 chr1:224628800-224643800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr1:224629200-224644200 Weak transcription Brain Germinal Matrix brain
41 chr1:224629200-224644600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
42 chr1:224630600-224641600 Weak transcription Rectal Mucosa Donor 29 rectum
43 chr1:224630600-224641600 Weak transcription K562 blood
44 chr1:224630800-224643000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
45 chr1:224630800-224644600 Weak transcription Primary T cells fromperipheralblood blood
46 chr1:224631000-224644200 Weak transcription Fetal Muscle Trunk muscle
47 chr1:224631200-224638800 Weak transcription Primary T cells from cord blood blood
48 chr1:224631200-224644400 Weak transcription Brain Inferior Temporal Lobe brain
49 chr1:224631600-224641400 Weak transcription Primary B cells from cord blood blood
50 chr1:224635200-224643800 Weak transcription Lung lung

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Last update: Aug 31, 2015