The 2.0 version of rSNPBase

Variant report

Variant rs885606
Chromosome Location chr1:224631870-224631871
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:224623200-224634800 Weak transcription Placenta Amnion Placenta Amnion
2 chr1:224623200-224644400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr1:224623400-224633400 Weak transcription Gastric stomach
4 chr1:224623400-224634600 Weak transcription Lung lung
5 chr1:224623400-224634800 Weak transcription Aorta Aorta
6 chr1:224623400-224634800 Weak transcription Left Ventricle heart
7 chr1:224623400-224634800 Weak transcription Ovary ovary
8 chr1:224623400-224634800 Weak transcription Right Atrium heart
9 chr1:224623400-224638000 Weak transcription H9 Cell Line embryonic stem cell
10 chr1:224623400-224641000 Weak transcription Fetal Intestine Large intestine
11 chr1:224623400-224643000 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr1:224623400-224644600 Weak transcription Right Ventricle heart
13 chr1:224623600-224635000 Weak transcription Skeletal Muscle Male skeletal muscle
14 chr1:224623600-224635600 Weak transcription Stomach Smooth Muscle stomach
15 chr1:224623600-224636200 Weak transcription Brain Cingulate Gyrus brain
16 chr1:224623600-224637400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
17 chr1:224623600-224642200 Weak transcription Duodenum Mucosa Duodenum
18 chr1:224623600-224644600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
19 chr1:224623600-224644600 Weak transcription Brain Substantia Nigra brain
20 chr1:224623800-224632600 Weak transcription iPS-15b Cell Line embryonic stem cell
21 chr1:224623800-224634800 Weak transcription Stomach Mucosa stomach
22 chr1:224623800-224635000 Weak transcription Monocytes-CD14+_RO01746 blood
23 chr1:224623800-224644400 Weak transcription Brain Anterior Caudate brain
24 chr1:224624000-224633000 Weak transcription Rectal Mucosa Donor 31 rectum
25 chr1:224624000-224633400 Weak transcription HUES6 Cell Line embryonic stem cell
26 chr1:224624000-224634000 Weak transcription Liver Liver
27 chr1:224624000-224634600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
28 chr1:224624000-224634600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr1:224624000-224634800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr1:224624000-224634800 Weak transcription Cortex derived primary cultured neurospheres brain
31 chr1:224624000-224634800 Weak transcription HSMMtube muscle
32 chr1:224624000-224635000 Weak transcription Primary monocytes fromperipheralblood blood
33 chr1:224624000-224635200 Weak transcription Rectal Smooth Muscle rectum
34 chr1:224624000-224635400 Weak transcription Duodenum Smooth Muscle Duodenum
35 chr1:224624000-224636200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
36 chr1:224624000-224637600 Weak transcription Fetal Thymus thymus
37 chr1:224624000-224642200 Weak transcription HUES48 Cell Line embryonic stem cell
38 chr1:224624000-224644000 Weak transcription Brain Hippocampus Middle brain
39 chr1:224624000-224644600 Weak transcription iPS-18 Cell Line embryonic stem cell
40 chr1:224624000-224644600 Weak transcription Brain Angular Gyrus brain
41 chr1:224624000-224645000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr1:224624000-224645000 Weak transcription Primary hematopoietic stem cells blood
43 chr1:224624000-224645000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
44 chr1:224624000-224646800 Weak transcription Primary B cells from peripheral blood blood
45 chr1:224624200-224632200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
46 chr1:224624200-224634600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
47 chr1:224624200-224634800 Weak transcription Osteobl bone
48 chr1:224624200-224642200 Weak transcription Primary hematopoietic stem cells short term culture blood
49 chr1:224624400-224637600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
50 chr1:224624600-224632000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015