Variant report
| Variant | rs35596688 |
|---|---|
| Chromosome Location | chr7:127030744-127030745 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr7:126988400-127031400 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 2 | chr7:126988400-127031400 | Weak transcription | Colonic Mucosa | Colon |
| 3 | chr7:126988400-127031400 | Weak transcription | Pancreas | Pancrea |
| 4 | chr7:126989000-127031000 | Weak transcription | Fetal Brain Male | brain |
| 5 | chr7:126997400-127031200 | Weak transcription | Brain Substantia Nigra | brain |
| 6 | chr7:126999400-127031400 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 7 | chr7:127001600-127031200 | Weak transcription | Fetal Stomach | stomach |
| 8 | chr7:127001600-127031400 | Weak transcription | Brain Angular Gyrus | brain |
| 9 | chr7:127001600-127031400 | Weak transcription | Esophagus | oesophagus |
| 10 | chr7:127001600-127031400 | Weak transcription | Gastric | stomach |
| 11 | chr7:127001600-127031400 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 12 | chr7:127001600-127031400 | Weak transcription | Right Ventricle | heart |
| 13 | chr7:127010200-127031400 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 14 | chr7:127012600-127030800 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 15 | chr7:127013800-127031200 | Weak transcription | Fetal Brain Female | brain |
| 16 | chr7:127014400-127031000 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 17 | chr7:127015000-127031000 | Weak transcription | Brain Anterior Caudate | brain |
| 18 | chr7:127015000-127031200 | Weak transcription | Brain Hippocampus Middle | brain |
| 19 | chr7:127015000-127031200 | Weak transcription | Thymus | Thymus |
| 20 | chr7:127015000-127031200 | Weak transcription | HSMMtube | muscle |
| 21 | chr7:127015000-127031400 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 22 | chr7:127015000-127031400 | Weak transcription | Fetal Kidney | kidney |
| 23 | chr7:127015000-127031400 | Weak transcription | Fetal Muscle Trunk | muscle |
| 24 | chr7:127015000-127031400 | Weak transcription | Lung | lung |
| 25 | chr7:127015200-127031200 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 26 | chr7:127018200-127031200 | Weak transcription | Brain Germinal Matrix | brain |
| 27 | chr7:127022200-127031200 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 28 | chr7:127023600-127031200 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 29 | chr7:127023600-127031200 | Weak transcription | Stomach Mucosa | stomach |
| 30 | chr7:127023600-127031200 | Weak transcription | Stomach Smooth Muscle | stomach |
| 31 | chr7:127023600-127031400 | Weak transcription | Fetal Muscle Leg | muscle |
| 32 | chr7:127023800-127031000 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 33 | chr7:127023800-127031200 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 34 | chr7:127023800-127031600 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 35 | chr7:127024200-127030800 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 36 | chr7:127024200-127031000 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 37 | chr7:127024600-127031200 | Enhancers | Primary T helper memory cells from peripheral blood 2 | blood |
| 38 | chr7:127024800-127031200 | Strong transcription | Primary B cells from peripheral blood | blood |
| 39 | chr7:127025200-127030800 | Strong transcription | Placenta | Placenta |
| 40 | chr7:127025200-127031200 | Enhancers | Primary T killer naive cells fromperipheralblood | blood |
| 41 | chr7:127026400-127030800 | Genic enhancers | Primary T helper cells fromperipheralblood | blood |
| 42 | chr7:127027400-127031000 | Genic enhancers | Primary T helper 17 cells PMA-I stimulated | -- |
| 43 | chr7:127027600-127031000 | Weak transcription | Colon Smooth Muscle | Colon |
| 44 | chr7:127027600-127031200 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 45 | chr7:127028000-127030800 | Strong transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 46 | chr7:127028000-127031200 | Strong transcription | Primary T cells fromperipheralblood | blood |
| 47 | chr7:127028000-127031200 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 48 | chr7:127028000-127031400 | Weak transcription | Left Ventricle | heart |
| 49 | chr7:127028000-127031400 | Weak transcription | Ovary | ovary |
| 50 | chr7:127028200-127030800 | Genic enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
