No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
nsv1063273 |
chr19:19591146-20061367 |
ZNF genes & repeats Genic enhancers Active TSS Flanking Active TSS Weak transcription Enhancers Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
67 gene(s)
|
inside rSNPs
|
diseases
|
2 |
nsv519535 |
chr19:19871250-20595412 |
Active TSS Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
56 gene(s)
|
inside rSNPs
|
diseases
|
3 |
nsv961192 |
chr19:19906394-20083740 |
Weak transcription Strong transcription Active TSS Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
17 gene(s)
|
inside rSNPs
|
diseases
|
4 |
esv3319016 |
chr19:19917475-20819154 |
Weak transcription ZNF genes & repeats Bivalent Enhancer Enhancers Strong transcription Active TSS Flanking Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
56 gene(s)
|
inside rSNPs
|
diseases
|
5 |
esv3319017 |
chr19:19917475-20819154 |
ZNF genes & repeats Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
56 gene(s)
|
inside rSNPs
|
diseases
|
6 |
esv3413756 |
chr19:19936066-20072059 |
ZNF genes & repeats Weak transcription Transcr. at gene 5' and 3' Strong transcription Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
17 gene(s)
|
inside rSNPs
|
diseases
|
7 |
esv3380276 |
chr19:19936583-20073601 |
Enhancers Active TSS Weak transcription ZNF genes & repeats Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
17 gene(s)
|
inside rSNPs
|
diseases
|
8 |
esv3429980 |
chr19:19943721-20102072 |
ZNF genes & repeats Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
15 gene(s)
|
inside rSNPs
|
diseases
|
9 |
nsv1061846 |
chr19:19946927-20595412 |
Flanking Active TSS Active TSS Enhancers Weak transcription Strong transcription ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
47 gene(s)
|
inside rSNPs
|
diseases
|
10 |
esv3390957 |
chr19:19965887-20819154 |
Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
53 gene(s)
|
inside rSNPs
|
diseases
|
11 |
nsv869122 |
chr19:19969851-20595412 |
ZNF genes & repeats Active TSS Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
47 gene(s)
|
inside rSNPs
|
diseases
|
12 |
nsv1057569 |
chr19:19973268-20193556 |
Enhancers Strong transcription ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
23 gene(s)
|
inside rSNPs
|
diseases
|
13 |
nsv1059158 |
chr19:19973489-20576161 |
Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Enhancers Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
43 gene(s)
|
inside rSNPs
|
diseases
|
14 |
esv3407363 |
chr19:20000919-20059307 |
Flanking Active TSS Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
10 gene(s)
|
inside rSNPs
|
diseases
|
15 |
nsv1056595 |
chr19:20020626-20061367 |
Weak transcription ZNF genes & repeats Strong transcription Enhancers Genic enhancers Active TSS Flanking Active TSS
|
TF binding regionChromatin interactive regionlncRNA
|
4 gene(s)
|
inside rSNPs
|
diseases
|
16 |
nsv458376 |
chr19:20021046-20151257 |
Strong transcription ZNF genes & repeats Weak transcription Enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
9 gene(s)
|
inside rSNPs
|
diseases
|
17 |
nsv578800 |
chr19:20021046-20151257 |
Weak transcription Strong transcription ZNF genes & repeats Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
9 gene(s)
|
inside rSNPs
|
diseases
|
18 |
nsv911319 |
chr19:20025940-20170214 |
ZNF genes & repeats Flanking Active TSS Weak transcription Active TSS Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
12 gene(s)
|
inside rSNPs
|
diseases
|
19 |
nsv870354 |
chr19:20043821-20576175 |
ZNF genes & repeats Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
34 gene(s)
|
inside rSNPs
|
diseases
|
20 |
nsv1062598 |
chr19:20053658-20106895 |
Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent/Poised TSS
|
Chromatin interactive regionlncRNA
|
3 gene(s)
|
inside rSNPs
|
diseases
|
21 |
nsv1062018 |
chr19:20053658-20193556 |
Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
12 gene(s)
|
inside rSNPs
|
diseases
|
22 |
nsv1066004 |
chr19:20053658-20592867 |
ZNF genes & repeats Weak transcription Flanking Active TSS Enhancers Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
35 gene(s)
|
inside rSNPs
|
diseases
|
23 |
nsv543932 |
chr19:20053658-20592867 |
Active TSS Weak transcription Strong transcription Enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Flanking Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
35 gene(s)
|
inside rSNPs
|
diseases
|
24 |
esv2555562 |
chr19:20054282-20054282 |
Weak transcription Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
inside rSNPs
|
diseases
|
25 |
esv2372850 |
chr19:20054282-20054283 |
Weak transcription Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
inside rSNPs
|
diseases
|