The 2.0 version of rSNPBase

Variant report

Variant rs35710390
Chromosome Location chr13:48702153-48702154
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:48697800-48702200 Enhancers Breast Myoepithelial Primary Cells Breast
2 chr13:48699600-48702200 Enhancers Rectal Smooth Muscle rectum
3 chr13:48700400-48702200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr13:48700400-48702200 Enhancers Colon Smooth Muscle Colon
5 chr13:48700400-48705600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr13:48701000-48702200 Enhancers HUES48 Cell Line embryonic stem cell
7 chr13:48701000-48702200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
8 chr13:48701000-48702200 Enhancers Primary T helper naive cells from peripheral blood blood
9 chr13:48701000-48702200 Enhancers Primary T helper 17 cells PMA-I stimulated --
10 chr13:48701200-48702200 Enhancers ES-I3 Cell Line embryonic stem cell
11 chr13:48701200-48702200 Enhancers H1 Cell Line embryonic stem cell
12 chr13:48701200-48702200 Enhancers iPS-15b Cell Line embryonic stem cell
13 chr13:48701200-48702200 Enhancers Primary monocytes fromperipheralblood blood
14 chr13:48701200-48702200 Enhancers Primary neutrophils fromperipheralblood blood
15 chr13:48701200-48702200 Enhancers Fetal Intestine Large intestine
16 chr13:48701200-48702200 Enhancers Fetal Intestine Small intestine
17 chr13:48701400-48702200 Enhancers Primary hematopoietic stem cells short term culture blood
18 chr13:48701600-48702200 Enhancers Primary T killer memory cells from peripheral blood blood
19 chr13:48701600-48702200 Enhancers HepG2 liver
20 chr13:48701600-48702400 Weak transcription Brain Hippocampus Middle brain
21 chr13:48701600-48704000 Enhancers Primary T helper naive cells fromperipheralblood blood
22 chr13:48701800-48702200 Enhancers iPS-20b Cell Line embryonic stem cell
23 chr13:48701800-48702200 Enhancers Adipose Nuclei Adipose
24 chr13:48701800-48705000 Weak transcription HMEC breast
25 chr13:48701800-48705800 Weak transcription Primary hematopoietic stem cells blood
26 chr13:48701800-48725800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr13:48702000-48702800 Enhancers Primary T helper cells PMA-I stimulated --
28 chr13:48702000-48703200 Weak transcription Primary T cells from cord blood blood
29 chr13:48702000-48703200 Weak transcription Primary T cells fromperipheralblood blood
30 chr13:48702000-48703200 Weak transcription Primary T helper cells fromperipheralblood blood
31 chr13:48702000-48703200 Weak transcription Fetal Thymus thymus
32 chr13:48702000-48703200 Weak transcription Dnd41 blood
33 chr13:48702000-48703400 Weak transcription Primary T killer naive cells fromperipheralblood blood
34 chr13:48702000-48704800 Weak transcription Primary B cells from peripheral blood blood
35 chr13:48702000-48705200 Weak transcription ES-WA7 Cell Line embryonic stem cell
36 chr13:48702000-48705200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr13:48702000-48705200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr13:48702000-48705200 Weak transcription NHEK skin
39 chr13:48702000-48705600 Weak transcription HUES6 Cell Line embryonic stem cell

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Last update: Aug 31, 2015