Variant report

Variant	rs35737707
Chromosome Location	chr7:124099678-124099679
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs1158515	1.00[ASN][1000 genomes]
rs34188843	1.00[ASN][1000 genomes]
rs35442377	1.00[AFR][1000 genomes]
rs73719003	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1795113	chr7:123885477-124188665	Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv429809	chr7:123937674-124835925	Enhancers Strong transcription Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	49 gene(s)	inside rSNPs	diseases
3	esv1808414	chr7:123957376-124188665	Enhancers Active TSS Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:124095800-124100000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
2	chr7:124097400-124101400	Enhancers	NHLF	lung
3	chr7:124097600-124099800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr7:124098600-124099800	Enhancers	Muscle Satellite Cultured Cells	--
5	chr7:124098800-124099800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
6	chr7:124098800-124100400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
7	chr7:124099000-124099800	Enhancers	Brain Angular Gyrus	brain
8	chr7:124099200-124099800	Enhancers	Placenta Amnion	Placenta Amnion
9	chr7:124099200-124101000	Enhancers	Fetal Lung	lung
10	chr7:124099200-124101600	Enhancers	HepG2	liver
11	chr7:124099400-124100000	Enhancers	Fetal Brain Male	brain
12	chr7:124099400-124100000	Enhancers	Fetal Kidney	kidney
13	chr7:124099400-124100200	Enhancers	Hela-S3	cervix
14	chr7:124099400-124102000	Enhancers	Fetal Stomach	stomach
15	chr7:124099400-124102000	Weak transcription	NHEK	skin
16	chr7:124099600-124100000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
17	chr7:124099600-124100000	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
18	chr7:124099600-124100000	Flanking Active TSS	A549	lung

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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