Variant report

Variant	rs35901369
Chromosome Location	chr14:32936325-32936326
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs11156747	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11623071	0.97[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12100892	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12100893	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12886735	0.93[ASN][1000 genomes]
rs1957025	0.88[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1957026	0.88[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34757755	0.99[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs941749	0.99[AMR][1000 genomes];0.96[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2758352	chr14:32858480-33016442	Enhancers Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	esv2759978	chr14:32858480-33016442	Enhancers Active TSS Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers ZNF genes & repeats Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv901595	chr14:32928634-32961434	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:32923800-32936400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr14:32926800-32936800	Weak transcription	Brain Cingulate Gyrus	brain
3	chr14:32930600-32936800	Weak transcription	Aorta	Aorta
4	chr14:32930600-32937400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
5	chr14:32931000-32941400	Weak transcription	Placenta Amnion	Placenta Amnion
6	chr14:32936200-32936400	Enhancers	Brain Angular Gyrus	brain
7	chr14:32936200-32937400	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
8	chr14:32936200-32937600	Enhancers	Fetal Heart	heart
9	chr14:32936200-32942800	Enhancers	Breast Myoepithelial Primary Cells	Breast
10	chr14:32936200-32942800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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