The 2.0 version of rSNPBase

Variant report

Variant rs35959877
Chromosome Location chr11:46932320-46932321
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:46911200-46933800 Weak transcription Fetal Kidney kidney
2 chr11:46917800-46934000 Weak transcription Rectal Mucosa Donor 31 rectum
3 chr11:46917800-46934000 Weak transcription NHLF lung
4 chr11:46918800-46934000 Weak transcription Colonic Mucosa Colon
5 chr11:46921600-46933800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr11:46921600-46933800 Weak transcription NHEK skin
7 chr11:46921600-46934000 Weak transcription Rectal Smooth Muscle rectum
8 chr11:46921600-46934200 Weak transcription Esophagus oesophagus
9 chr11:46921600-46936000 Weak transcription Pancreas Pancrea
10 chr11:46921600-46936000 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr11:46921800-46934000 Weak transcription Fetal Intestine Large intestine
12 chr11:46921800-46938400 Weak transcription Gastric stomach
13 chr11:46922200-46934000 Weak transcription Duodenum Mucosa Duodenum
14 chr11:46922200-46934000 Weak transcription Fetal Intestine Small intestine
15 chr11:46923000-46933800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr11:46926000-46934000 Weak transcription Fetal Brain Male brain
17 chr11:46926200-46932800 Weak transcription Skeletal Muscle Male skeletal muscle
18 chr11:46926400-46934000 Weak transcription Right Atrium heart
19 chr11:46926400-46934000 Weak transcription Right Ventricle heart
20 chr11:46927800-46933600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr11:46927800-46933600 Weak transcription Spleen Spleen
22 chr11:46928400-46934000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
23 chr11:46928600-46933200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
24 chr11:46928600-46933800 Weak transcription Breast Myoepithelial Primary Cells Breast
25 chr11:46928600-46933800 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr11:46928600-46933800 Weak transcription HSMMtube muscle
27 chr11:46928600-46934000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr11:46928600-46934000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr11:46928600-46934000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
30 chr11:46928600-46934200 Weak transcription Stomach Mucosa stomach
31 chr11:46928600-46937200 Weak transcription HepG2 liver
32 chr11:46928800-46933000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
33 chr11:46928800-46933600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr11:46928800-46933600 Weak transcription Fetal Muscle Trunk muscle
35 chr11:46928800-46933800 Weak transcription Brain Germinal Matrix brain
36 chr11:46928800-46933800 Weak transcription Fetal Brain Female brain
37 chr11:46928800-46933800 Weak transcription Fetal Stomach stomach
38 chr11:46928800-46933800 Weak transcription NH-A brain
39 chr11:46928800-46934000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
40 chr11:46928800-46934000 Weak transcription Fetal Muscle Leg muscle
41 chr11:46928800-46934000 Weak transcription Left Ventricle heart
42 chr11:46929000-46933600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr11:46929000-46934000 Weak transcription Stomach Smooth Muscle stomach
44 chr11:46929000-46934200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr11:46929200-46933800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr11:46929200-46933800 Weak transcription Fetal Lung lung
47 chr11:46929400-46933400 Weak transcription iPS-15b Cell Line embryonic stem cell
48 chr11:46929400-46933600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
49 chr11:46929400-46933600 Weak transcription Fetal Heart heart
50 chr11:46929400-46934600 Weak transcription ES-WA7 Cell Line embryonic stem cell

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Last update: Aug 31, 2015