The 2.0 version of rSNPBase

Variant report

Variant rs360052
Chromosome Location chr11:9714578-9714579
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:106 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:9686800-9716400 Weak transcription Ovary ovary
2 chr11:9704200-9723600 Weak transcription HepG2 liver
3 chr11:9709600-9715600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr11:9710200-9758400 Weak transcription Psoas Muscle Psoas
5 chr11:9710400-9732800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
6 chr11:9710600-9717000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
7 chr11:9710600-9722000 Weak transcription Fetal Brain Female brain
8 chr11:9711000-9717000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr11:9711200-9715400 Enhancers HMEC breast
10 chr11:9711200-9715400 Enhancers NHEK skin
11 chr11:9711200-9715600 Enhancers Primary hematopoietic stem cells blood
12 chr11:9711200-9732800 Weak transcription H9 Cell Line embryonic stem cell
13 chr11:9711400-9715400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr11:9711400-9715600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr11:9711400-9715600 Enhancers Primary hematopoietic stem cells short term culture blood
16 chr11:9711400-9715600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr11:9711400-9715600 Enhancers Brain Anterior Caudate brain
18 chr11:9711400-9715800 Weak transcription Primary T cells from cord blood blood
19 chr11:9711400-9715800 Enhancers Brain Hippocampus Middle brain
20 chr11:9711400-9715800 Weak transcription Hela-S3 cervix
21 chr11:9711400-9717000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
22 chr11:9711400-9718800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr11:9711400-9754400 Weak transcription Placenta Amnion Placenta Amnion
24 chr11:9711600-9714600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr11:9711600-9715200 Weak transcription Fetal Thymus thymus
26 chr11:9711600-9715200 Weak transcription Pancreas Pancrea
27 chr11:9711600-9715400 Weak transcription iPS-18 Cell Line embryonic stem cell
28 chr11:9711600-9715600 Weak transcription H1 Cell Line embryonic stem cell
29 chr11:9711600-9715600 Enhancers Brain Cingulate Gyrus brain
30 chr11:9711600-9715600 Weak transcription Esophagus oesophagus
31 chr11:9711600-9715600 Weak transcription Fetal Adrenal Gland Adrenal Gland
32 chr11:9711600-9715600 Weak transcription Fetal Muscle Trunk muscle
33 chr11:9711600-9715600 Weak transcription Placenta Placenta
34 chr11:9711600-9715600 Weak transcription Sigmoid Colon Sigmoid Colon
35 chr11:9711600-9715600 Weak transcription Spleen Spleen
36 chr11:9711600-9715800 Enhancers Brain Substantia Nigra brain
37 chr11:9711600-9716400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
38 chr11:9711600-9716600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr11:9711600-9716600 Weak transcription Fetal Stomach stomach
40 chr11:9711600-9716800 Weak transcription Rectal Smooth Muscle rectum
41 chr11:9711600-9723600 Weak transcription Fetal Lung lung
42 chr11:9711600-9724000 Weak transcription Rectal Mucosa Donor 29 rectum
43 chr11:9711600-9724400 Weak transcription Skeletal Muscle Male skeletal muscle
44 chr11:9711600-9725800 Weak transcription HSMMtube muscle
45 chr11:9711600-9729600 Weak transcription Fetal Heart heart
46 chr11:9711600-9730200 Weak transcription Right Ventricle heart
47 chr11:9711600-9731400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
48 chr11:9711600-9732800 Weak transcription Skeletal Muscle Female skeletal muscle
49 chr11:9711600-9733200 Weak transcription Aorta Aorta
50 chr11:9711600-9736600 Weak transcription Gastric stomach

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Last update: Aug 31, 2015