Variant report

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs12536739	0.83[AFR][1000 genomes]
rs13239238	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2237633	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2299378	0.87[ASN][1000 genomes]
rs2299380	0.87[ASN][1000 genomes]
rs3213613	0.80[ASN][1000 genomes]
rs35441390	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs473940	0.84[ASN][1000 genomes]
rs477444	0.84[ASN][1000 genomes]
rs478549	0.84[ASN][1000 genomes]
rs507226	0.84[ASN][1000 genomes]
rs512529	0.84[ASN][1000 genomes]
rs525692	0.84[ASN][1000 genomes]
rs528528	0.84[ASN][1000 genomes]
rs531330	0.84[ASN][1000 genomes]
rs541768	0.88[ASN][1000 genomes]
rs562393	0.84[ASN][1000 genomes]
rs562444	0.84[ASN][1000 genomes]
rs570418	0.84[ASN][1000 genomes]
rs571990	0.84[ASN][1000 genomes]
rs607755	0.83[ASN][1000 genomes]
rs620243	0.84[ASN][1000 genomes]
rs620774	0.88[ASN][1000 genomes]
rs621223	0.84[ASN][1000 genomes]
rs621311	0.82[ASN][1000 genomes]
rs622657	0.84[ASN][1000 genomes]
rs62480693	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs637577	0.84[ASN][1000 genomes]
rs637606	0.84[ASN][1000 genomes]
rs651097	0.83[ASN][1000 genomes]
rs671372	0.81[ASN][1000 genomes]
rs682507	0.84[ASN][1000 genomes]
rs683390	0.84[ASN][1000 genomes]
rs6953960	0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv491911	chr7:102967150-103403622	Flanking Bivalent TSS/Enh Enhancers Weak transcription Bivalent Enhancer Strong transcription Bivalent/Poised TSS Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
2	nsv427799	chr7:103250733-103454202	Enhancers Strong transcription Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:103375200-103391000	Weak transcription	HepG2	liver

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