The 2.0 version of rSNPBase

Variant report

Variant rs36023127
Chromosome Location chr15:42631928-42631929
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:42568400-42656000 Weak transcription Small Intestine intestine
2 chr15:42573400-42635800 Weak transcription Gastric stomach
3 chr15:42601200-42636000 Weak transcription Brain Germinal Matrix brain
4 chr15:42603200-42636000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr15:42603400-42648600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
6 chr15:42603400-42648600 Weak transcription Primary T killer memory cells from peripheral blood blood
7 chr15:42604000-42639400 Weak transcription Placenta Amnion Placenta Amnion
8 chr15:42604600-42651200 Weak transcription Fetal Kidney kidney
9 chr15:42606200-42634600 Weak transcription Pancreas Pancrea
10 chr15:42616200-42634600 Weak transcription Fetal Stomach stomach
11 chr15:42616200-42636600 Weak transcription NHEK skin
12 chr15:42616800-42636000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr15:42617000-42645000 Weak transcription NHLF lung
14 chr15:42618000-42636000 Weak transcription Colonic Mucosa Colon
15 chr15:42618600-42634800 Weak transcription Placenta Placenta
16 chr15:42619600-42634400 Weak transcription Aorta Aorta
17 chr15:42619600-42634400 Weak transcription Ovary ovary
18 chr15:42619600-42634800 Weak transcription Brain Cingulate Gyrus brain
19 chr15:42619600-42635000 Weak transcription Brain Hippocampus Middle brain
20 chr15:42619600-42635600 Weak transcription Thymus Thymus
21 chr15:42619600-42635600 Weak transcription Spleen Spleen
22 chr15:42619600-42640000 Weak transcription NHDF-Ad bronchial
23 chr15:42619600-42647200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
24 chr15:42619600-42656200 Weak transcription HMEC breast
25 chr15:42620200-42635000 Weak transcription Brain Substantia Nigra brain
26 chr15:42620600-42634600 Weak transcription Fetal Intestine Large intestine
27 chr15:42620600-42634800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr15:42621800-42635000 Weak transcription Rectal Smooth Muscle rectum
29 chr15:42621800-42635800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
30 chr15:42621800-42636000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
31 chr15:42623800-42634800 Weak transcription Brain Angular Gyrus brain
32 chr15:42623800-42634800 Weak transcription Rectal Mucosa Donor 31 rectum
33 chr15:42623800-42635400 Weak transcription Colon Smooth Muscle Colon
34 chr15:42623800-42635800 Weak transcription Esophagus oesophagus
35 chr15:42624000-42635600 Weak transcription Skeletal Muscle Male skeletal muscle
36 chr15:42626800-42643400 Weak transcription Fetal Thymus thymus
37 chr15:42627600-42634600 Weak transcription Primary T helper naive cells fromperipheralblood blood
38 chr15:42627600-42634600 Weak transcription Duodenum Smooth Muscle Duodenum
39 chr15:42627600-42634600 Weak transcription Rectal Mucosa Donor 29 rectum
40 chr15:42627600-42635400 Weak transcription Left Ventricle heart
41 chr15:42627600-42654600 Weak transcription HSMM muscle
42 chr15:42627800-42634600 Weak transcription Breast Myoepithelial Primary Cells Breast
43 chr15:42627800-42634600 Weak transcription Psoas Muscle Psoas
44 chr15:42627800-42634600 Weak transcription Stomach Smooth Muscle stomach
45 chr15:42627800-42634800 Weak transcription Adipose Nuclei Adipose
46 chr15:42627800-42635000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr15:42627800-42635200 Weak transcription Primary T regulatory cells fromperipheralblood blood
48 chr15:42627800-42636600 Weak transcription Osteobl bone
49 chr15:42627800-42643800 Weak transcription Primary T helper naive cells from peripheral blood blood
50 chr15:42628000-42634400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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Last update: Aug 31, 2015