The 2.0 version of rSNPBase

Variant report

Variant rs36027324
Chromosome Location chr2:173112818-173112819
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:173100400-173113000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr2:173105200-173116200 Enhancers Breast Myoepithelial Primary Cells Breast
3 chr2:173105200-173116800 Weak transcription Right Atrium heart
4 chr2:173105400-173113200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
5 chr2:173107000-173113000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr2:173108200-173115800 Weak transcription Fetal Thymus thymus
7 chr2:173108400-173113800 Weak transcription Brain Cingulate Gyrus brain
8 chr2:173108600-173118200 Weak transcription Duodenum Mucosa Duodenum
9 chr2:173109400-173119400 Enhancers HMEC breast
10 chr2:173109800-173113200 Weak transcription HSMM muscle
11 chr2:173109800-173113200 Weak transcription HSMMtube muscle
12 chr2:173110000-173114600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr2:173110000-173114800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr2:173110200-173119200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr2:173110400-173113000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr2:173110600-173114000 Weak transcription Brain Inferior Temporal Lobe brain
17 chr2:173110600-173115200 Weak transcription iPS-18 Cell Line embryonic stem cell
18 chr2:173110800-173116800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
19 chr2:173110800-173118000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr2:173110800-173118000 Weak transcription Rectal Mucosa Donor 31 rectum
21 chr2:173111000-173113000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr2:173111000-173115600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr2:173111200-173113200 Enhancers NHEK skin
24 chr2:173111200-173115800 Enhancers HUVEC blood vessel
25 chr2:173111400-173113600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
26 chr2:173111400-173113800 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
27 chr2:173111400-173114200 Enhancers HUES6 Cell Line embryonic stem cell
28 chr2:173111400-173119800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
29 chr2:173111600-173115000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr2:173111600-173117600 Weak transcription Monocytes-CD14+_RO01746 blood
31 chr2:173111600-173119200 Enhancers ES-I3 Cell Line embryonic stem cell
32 chr2:173111800-173113000 Weak transcription A549 lung
33 chr2:173111800-173113200 Weak transcription Hela-S3 cervix
34 chr2:173111800-173113200 Weak transcription NHDF-Ad bronchial
35 chr2:173111800-173113600 Weak transcription HUES48 Cell Line embryonic stem cell
36 chr2:173111800-173115000 Enhancers NH-A brain
37 chr2:173111800-173117200 Enhancers Placenta Amnion Placenta Amnion
38 chr2:173112000-173113000 Weak transcription iPS-20b Cell Line embryonic stem cell
39 chr2:173112000-173113200 Weak transcription Muscle Satellite Cultured Cells --
40 chr2:173112000-173113600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr2:173112000-173116000 Weak transcription Cortex derived primary cultured neurospheres brain
42 chr2:173112200-173113200 Weak transcription HUES64 Cell Line embryonic stem cell
43 chr2:173112200-173113400 Weak transcription H9 Cell Line embryonic stem cell
44 chr2:173112200-173113800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
45 chr2:173112200-173115600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
46 chr2:173112200-173115600 Weak transcription Brain Anterior Caudate brain
47 chr2:173112200-173116000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
48 chr2:173112400-173113200 Weak transcription NHLF lung
49 chr2:173112400-173119600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr2:173112600-173113000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015