Variant report

Variant	rs36067212
Chromosome Location	chr11:101051755-101051756
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 22 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs12790750	0.91[ASN][1000 genomes]
rs12807358	0.89[ASN][1000 genomes]
rs1893505	0.89[ASN][1000 genomes]
rs34223959	0.84[ASN][1000 genomes]
rs34366947	0.91[ASN][1000 genomes]
rs34376991	0.95[ASN][1000 genomes]
rs34391750	0.89[ASN][1000 genomes]
rs34712605	0.91[ASN][1000 genomes]
rs34910169	0.89[ASN][1000 genomes]
rs35253160	0.91[ASN][1000 genomes]
rs35401637	0.91[ASN][1000 genomes]
rs35538677	0.89[ASN][1000 genomes]
rs35978545	0.89[ASN][1000 genomes]
rs4121759	0.91[ASN][1000 genomes]
rs71476669	0.95[ASN][1000 genomes]
rs71476670	0.95[ASN][1000 genomes]
rs71476671	0.91[ASN][1000 genomes]
rs71476672	0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1048356	chr11:100713096-101058995	Strong transcription Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
2	nsv541154	chr11:100713096-101058995	Flanking Bivalent TSS/Enh Weak transcription Enhancers Bivalent/Poised TSS Genic enhancers Flanking Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
3	nsv556131	chr11:100985777-101480017	Weak transcription Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	7 gene(s)	inside rSNPs	diseases
4	nsv530644	chr11:101010088-101486038	Strong transcription Weak transcription Active TSS Enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:101037400-101080800	Weak transcription	Left Ventricle	heart
2	chr11:101046600-101058600	Weak transcription	Aorta	Aorta
3	chr11:101050800-101051800	Enhancers	Brain Substantia Nigra	brain
4	chr11:101051000-101052000	Strong transcription	Ovary	ovary
5	chr11:101051200-101054400	Weak transcription	Breast Myoepithelial Primary Cells	Breast

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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