Variant report

Variant	rs36088292
Chromosome Location	chr8:2289229-2289230
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 34 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs10101831	1.00[ASN][1000 genomes]
rs11985641	1.00[ASN][1000 genomes]
rs13266225	1.00[ASN][1000 genomes]
rs13276984	0.95[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1455642	1.00[ASN][1000 genomes]
rs1455643	1.00[ASN][1000 genomes]
rs1677779	1.00[ASN][1000 genomes]
rs17064827	1.00[ASN][1000 genomes]
rs17070604	1.00[ASN][1000 genomes]
rs2607667	1.00[ASN][1000 genomes]
rs2618837	1.00[ASN][1000 genomes]
rs315234	1.00[ASN][1000 genomes]
rs34068272	0.95[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34756611	0.95[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35169761	0.84[EUR][1000 genomes]
rs35399556	0.95[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35497453	0.95[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35498486	0.95[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35646845	0.95[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4452813	1.00[ASN][1000 genomes]
rs56781377	1.00[ASN][1000 genomes]
rs6558654	1.00[ASN][1000 genomes]
rs66502377	0.95[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7007817	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71519862	1.00[ASN][1000 genomes]
rs71519863	0.95[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71519864	0.95[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7812858	1.00[ASN][1000 genomes]
rs7812885	1.00[ASN][1000 genomes]
rs7816548	1.00[ASN][1000 genomes]
rs7833738	1.00[ASN][1000 genomes]
rs7844153	1.00[ASN][1000 genomes]
rs930843	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv889712	chr8:1591412-2337777	Weak transcription Active TSS Strong transcription Enhancers ZNF genes & repeats Bivalent Enhancer Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	22 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:2283200-2296200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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