Variant report

Variant	rs36176150
Chromosome Location	chr11:121243198-121243199
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs11826929	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12798486	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12805903	0.93[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2512090	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs297488	1.00[ASN][1000 genomes]
rs34172324	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34266697	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34561827	0.93[AMR][1000 genomes]
rs34571866	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34687160	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35269930	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35556203	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4565910	0.81[AMR][1000 genomes]
rs55636130	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56217499	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60870189	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61903106	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61903107	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61903131	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61903133	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7129394	0.81[AMR][1000 genomes]
rs71486380	0.81[AMR][1000 genomes]
rs7928372	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:55 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:121230800-121249800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr11:121238400-121243600	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
3	chr11:121238600-121243400	Weak transcription	Rectal Mucosa Donor 29	rectum
4	chr11:121238800-121243400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
5	chr11:121239200-121243600	Weak transcription	Thymus	Thymus
6	chr11:121239400-121243200	Weak transcription	Primary T cells fromperipheralblood	blood
7	chr11:121239400-121243200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
8	chr11:121239400-121243400	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
9	chr11:121239400-121243400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
10	chr11:121239400-121244600	Weak transcription	Rectal Smooth Muscle	rectum
11	chr11:121239600-121245000	Weak transcription	Colon Smooth Muscle	Colon
12	chr11:121239600-121259200	Weak transcription	Psoas Muscle	Psoas
13	chr11:121239800-121243200	Weak transcription	Fetal Thymus	thymus
14	chr11:121239800-121243400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
15	chr11:121240000-121243400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
16	chr11:121240000-121243600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
17	chr11:121240000-121243600	Weak transcription	Primary T cells from cord blood	blood
18	chr11:121240200-121243400	Weak transcription	Primary hematopoietic stem cells	blood
19	chr11:121240200-121243400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
20	chr11:121240400-121243200	Weak transcription	Monocytes-CD14+_RO01746	blood
21	chr11:121240600-121243200	Weak transcription	Primary B cells from cord blood	blood
22	chr11:121240600-121243200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
23	chr11:121242000-121243400	Enhancers	iPS-18 Cell Line	embryonic stem cell
24	chr11:121242000-121244200	Enhancers	Rectal Mucosa Donor 31	rectum
25	chr11:121242000-121245200	Enhancers	Primary T helper naive cells from peripheral blood	blood
26	chr11:121242000-121246400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
27	chr11:121242200-121243600	Enhancers	Primary T helper cells PMA-I stimulated	--
28	chr11:121242400-121243200	Enhancers	GM12878-XiMat	blood
29	chr11:121242400-121243400	Enhancers	HUES64 Cell Line	embryonic stem cell
30	chr11:121242400-121243600	Enhancers	iPS-15b Cell Line	embryonic stem cell
31	chr11:121242400-121245000	Enhancers	Sigmoid Colon	Sigmoid Colon
32	chr11:121242600-121243200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
33	chr11:121242600-121243400	Enhancers	Fetal Intestine Small	intestine
34	chr11:121242600-121244200	Enhancers	Duodenum Mucosa	Duodenum
35	chr11:121242600-121244400	Enhancers	Dnd41	blood
36	chr11:121242600-121244800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
37	chr11:121242600-121244800	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
38	chr11:121242600-121245000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
39	chr11:121242600-121245600	Enhancers	ES-I3 Cell Line	embryonic stem cell
40	chr11:121242600-121246000	Enhancers	H9 Cell Line	embryonic stem cell
41	chr11:121242600-121246400	Enhancers	H1 Cell Line	embryonic stem cell
42	chr11:121242600-121246400	Enhancers	HUES48 Cell Line	embryonic stem cell
43	chr11:121242600-121251200	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
44	chr11:121242800-121243200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
45	chr11:121242800-121243400	Enhancers	HUES6 Cell Line	embryonic stem cell
46	chr11:121242800-121243400	Enhancers	Primary T helper naive cells fromperipheralblood	blood
47	chr11:121242800-121243800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
48	chr11:121242800-121244400	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
49	chr11:121243000-121243600	Enhancers	Primary B cells from peripheral blood	blood
50	chr11:121243000-121243600	Weak transcription	Fetal Intestine Large	intestine

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