| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv469169 |
chr12:24692383-25357680 |
Enhancers Active TSS Flanking Active TSS Strong transcription Genic enhancers Bivalent Enhancer Weak transcription Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
34 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv557775 |
chr12:24692383-25357680 |
Bivalent Enhancer Enhancers Flanking Active TSS Weak transcription Strong transcription Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
34 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv932477 |
chr12:24705151-25346677 |
Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats Strong transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
30 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv1067577 |
chr12:24791283-25346677 |
Enhancers Weak transcription Flanking Active TSS Genic enhancers Active TSS Strong transcription Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
22 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv529514 |
chr12:24791283-25346677 |
Enhancers Weak transcription Strong transcription Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
22 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv1041218 |
chr12:24972019-25304356 |
Weak transcription Enhancers ZNF genes & repeats Strong transcription Bivalent Enhancer Active TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
17 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
nsv557796 |
chr12:25266203-25306458 |
Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 8 |
nsv515612 |
chr12:25272027-25341177 |
Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive region
|
3 gene(s)
|
inside rSNPs
|
diseases
|
| 9 |
nsv557797 |
chr12:25272027-25341177 |
Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive region
|
3 gene(s)
|
inside rSNPs
|
diseases
|
| 10 |
nsv898922 |
chr12:25274593-25408047 |
Genic enhancers Flanking Active TSS Enhancers Active TSS Flanking Bivalent TSS/Enh Weak transcription Strong transcription Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
15 gene(s)
|
inside rSNPs
|
diseases
|
| 11 |
esv2652823 |
chr12:25284914-25286465 |
Weak transcription Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 12 |
esv2064539 |
chr12:25285213-25286072 |
Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
inside rSNPs
|
diseases
|
Variant overlapped rSNPs/rCNVs (count:12 , 50 per page) page:
1
