Variant report

Variant	rs369774676
Chromosome Location	chr9:100848877-100848878
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr9:100838071..100839825-chr9:100848704..100850871,2	K562	blood:
2	chr9:100841190..100843013-chr9:100847159..100849959,2	K562	blood:
3	chr9:100845133..100849564-chr9:100852067..100857931,7	K562	blood:
4	chr9:100843269..100846185-chr9:100848032..100850204,2	K562	blood:

Variant related genes	Relation type
ENSG00000106785	Chromatin interaction
ENSG00000095380	Chromatin interaction

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv482635	chr9:100775549-100953239	Active TSS Enhancers Weak transcription Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
2	nsv1040483	chr9:100835325-100868437	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	9 gene(s)	inside rSNPs	diseases
3	esv3422585	chr9:100846431-100849383	Strong transcription Enhancers Weak transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Active TSS	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
4	esv3341074	chr9:100848756-100851304	Weak transcription Strong transcription Active TSS Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:121 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:100820000-100849600	Weak transcription	Fetal Brain Male	brain
2	chr9:100820000-100850000	Weak transcription	Fetal Kidney	kidney
3	chr9:100821200-100849600	Weak transcription	Right Atrium	heart
4	chr9:100838200-100852800	Strong transcription	Primary hematopoietic stem cells short term culture	blood
5	chr9:100838600-100852000	Strong transcription	GM12878-XiMat	blood
6	chr9:100839000-100849600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
7	chr9:100839000-100849800	Strong transcription	Monocytes-CD14+_RO01746	blood
8	chr9:100839400-100850400	Strong transcription	Dnd41	blood
9	chr9:100839400-100861800	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
10	chr9:100839600-100849400	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
11	chr9:100839600-100850600	Strong transcription	Thymus	Thymus
12	chr9:100842400-100849800	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
13	chr9:100842800-100850200	Weak transcription	Fetal Heart	heart
14	chr9:100843800-100849800	Weak transcription	Ovary	ovary
15	chr9:100843800-100849800	Weak transcription	Placenta Amnion	Placenta Amnion
16	chr9:100844000-100849600	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
17	chr9:100844000-100849800	Weak transcription	Colon Smooth Muscle	Colon
18	chr9:100844000-100850000	Weak transcription	Brain Inferior Temporal Lobe	brain
19	chr9:100844600-100849400	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
20	chr9:100844800-100850000	Weak transcription	Brain Substantia Nigra	brain
21	chr9:100845000-100849800	Weak transcription	Skeletal Muscle Female	skeletal muscle
22	chr9:100845000-100850000	Weak transcription	Duodenum Smooth Muscle	Duodenum
23	chr9:100845000-100850600	Strong transcription	Primary T helper 17 cells PMA-I stimulated	--
24	chr9:100845200-100849600	Weak transcription	Psoas Muscle	Psoas
25	chr9:100845200-100850000	Weak transcription	NHDF-Ad	bronchial
26	chr9:100845200-100853000	Strong transcription	Primary T cells fromperipheralblood	blood
27	chr9:100845200-100856200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
28	chr9:100845200-100856600	Weak transcription	Small Intestine	intestine
29	chr9:100845400-100849800	Strong transcription	Primary T helper naive cells from peripheral blood	blood
30	chr9:100845800-100849600	Weak transcription	Stomach Mucosa	stomach
31	chr9:100845800-100850000	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
32	chr9:100845800-100850000	Strong transcription	Lung	lung
33	chr9:100845800-100853600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
34	chr9:100846000-100849400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
35	chr9:100846000-100849600	Weak transcription	Aorta	Aorta
36	chr9:100846000-100849600	Weak transcription	Brain Germinal Matrix	brain
37	chr9:100846000-100849600	Weak transcription	Skeletal Muscle Male	skeletal muscle
38	chr9:100846000-100849600	Strong transcription	Spleen	Spleen
39	chr9:100846000-100849600	Weak transcription	Osteobl	bone
40	chr9:100846000-100849800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
41	chr9:100846000-100849800	Weak transcription	Right Ventricle	heart
42	chr9:100846000-100849800	Weak transcription	NH-A	brain
43	chr9:100846000-100850000	Weak transcription	Rectal Smooth Muscle	rectum
44	chr9:100846000-100850000	Weak transcription	HSMM	muscle
45	chr9:100846000-100850200	Weak transcription	Fetal Lung	lung
46	chr9:100846000-100862600	Strong transcription	Primary monocytes fromperipheralblood	blood
47	chr9:100846200-100849600	Weak transcription	Fetal Muscle Leg	muscle
48	chr9:100846200-100849600	Strong transcription	Rectal Mucosa Donor 29	rectum
49	chr9:100846200-100849800	Weak transcription	Brain Cingulate Gyrus	brain
50	chr9:100846200-100850000	Strong transcription	Liver	Liver

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