Variant report

Variant	rs369836
Chromosome Location	chr10:4738488-4738489
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs313431	1.00[AFR][1000 genomes]
rs313432	1.00[AFR][1000 genomes]
rs9423374	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv894787	chr10:4385379-4857717	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
2	nsv1040924	chr10:4734176-4765606	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:4734200-4745800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
2	chr10:4734400-4742800	Weak transcription	NHLF	lung
3	chr10:4734400-4743200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr10:4734600-4742800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
5	chr10:4734800-4740200	Weak transcription	Muscle Satellite Cultured Cells	--
6	chr10:4734800-4740200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr10:4734800-4745600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr10:4735000-4740200	Weak transcription	HMEC	breast
9	chr10:4735000-4746000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
10	chr10:4736400-4746400	Weak transcription	Psoas Muscle	Psoas
11	chr10:4736400-4746400	Weak transcription	Skeletal Muscle Female	skeletal muscle
12	chr10:4738000-4738600	Enhancers	Fetal Muscle Leg	muscle
13	chr10:4738400-4755600	Weak transcription	Right Atrium	heart

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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