Variant report

Variant	rs3733350
Chromosome Location	chr4:1020129-1020130
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:63)
CpG islands
(count:0)
Chromatin interactive
region (count:1)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:63 , 50 per page) page: 1 2

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	TBL1XR1	chr4:1020082-1020295	GM12878	blood:	n/a	n/a
2	MYC	chr4:1019688-1020173	MCF-7	breast:	n/a	n/a
3	MAX	chr4:1019930-1020221	K562	blood:	n/a	n/a
4	POLR2A	chr4:1019699-1020716	HCT-116	colon:	n/a	n/a
5	PAX5	chr4:1019760-1020264	GM12878	blood:	n/a	n/a
6	POU2F2	chr4:1019765-1020353	GM12878	blood:	n/a	n/a
7	POLR2A	chr4:1019688-1021202	NB4	blood:	n/a	n/a
8	POLR2A	chr4:1019033-1024348	K562	blood:	n/a	n/a
9	CBX3	chr4:1019729-1020203	K562	blood:	n/a	n/a
10	MAX	chr4:1019817-1020183	NB4	blood:	n/a	n/a
11	RELA	chr4:1019923-1020278	GM18951	blood:	n/a	n/a
12	POLR2A	chr4:1019231-1020198	HepG2	liver:	n/a	n/a
13	PBX3	chr4:1020005-1020300	GM12878	blood:	n/a	n/a
14	STAT1	chr4:1019967-1020475	GM12878	blood:	n/a	n/a
15	MYC	chr4:1019939-1020220	MCF-7	breast:	n/a	n/a
16	MAZ	chr4:1019977-1020387	GM12878	blood:	n/a	n/a
17	BHLHE40	chr4:1019826-1020256	K562	blood:	n/a	n/a
18	POLR2A	chr4:1019771-1022225	HCT-116	colon:	n/a	n/a
19	ELF1	chr4:1019718-1020332	GM12878	blood:	n/a	n/a
20	EBF1	chr4:1019783-1020339	GM12878	blood:	n/a	n/a
21	POLR2A	chr4:1019526-1020246	GM12878	blood:	n/a	n/a
22	MXI1	chr4:1019824-1020223	GM12878	blood:	n/a	n/a
23	POLR2A	chr4:1019105-1020255	MCF-7	breast:	n/a	n/a
24	POLR2A	chr4:1019282-1020185	MCF-7	breast:	n/a	n/a
25	POLR2A	chr4:1019523-1021908	SK-N-MC	brain:	n/a	n/a
26	BHLHE40	chr4:1019803-1020291	GM12878	blood:	n/a	n/a
27	EP300	chr4:1019895-1020206	GM12878	blood:	n/a	n/a
28	CHD2	chr4:1019944-1020281	GM12878	blood:	n/a	n/a
29	KAP1	chr4:1019400-1020144	HEK293	kidney:	n/a	n/a
30	MYC	chr4:1019964-1020193	MCF10A-Er-Src	breast:	n/a	n/a
31	POLR2A	chr4:1019434-1020422	GM12878	blood:	n/a	n/a
32	POLR2A	chr4:1020044-1020160	MCF10A-Er-Src	breast:	n/a	n/a
33	MYC	chr4:1019848-1020223	MCF-7	breast:	n/a	n/a
34	MAX	chr4:1019870-1020185	GM12878	blood:	n/a	n/a
35	POLR2A	chr4:1020050-1020204	Hela-S3	cervix:	n/a	n/a
36	JUND	chr4:1019880-1020147	A549	lung:	n/a	n/a
37	SUZ12	chr4:1019460-1020167	H1-hESC	embryonic stem cell:	n/a	n/a
38	FOSL2	chr4:1019981-1020461	HepG2	liver:	n/a	n/a
39	POLR2A	chr4:1019488-1020313	A549	lung:	n/a	n/a
40	POLR2A	chr4:1018997-1022953	K562	blood:	n/a	n/a
41	BCL3	chr4:1019806-1020326	A549	lung:	n/a	n/a
42	POLR2A	chr4:1019610-1020312	GM12892	blood:	n/a	n/a
43	MYC	chr4:1019951-1020230	MCF10A-Er-Src	breast:	n/a	n/a
44	POLR2A	chr4:1019674-1020463	HepG2	liver:	n/a	n/a
45	POLR2A	chr4:1019803-1020193	GM12878	blood:	n/a	n/a
46	MAZ	chr4:1020079-1020297	K562	blood:	n/a	n/a
47	ELK1	chr4:1019954-1020267	GM12878	blood:	n/a	n/a
48	ZNF263	chr4:1019177-1020314	HEK293-T-REx	kidney:	n/a	n/a
49	USF2	chr4:1019895-1020219	GM12878	blood:	n/a	n/a
50	WRNIP1	chr4:1019988-1020288	GM12878	blood:	n/a	n/a

No data

(count:1 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:717897..720385-chr4:1019006..1020826,2	K562	blood:

No data

Variant related genes	Relation type
ENSG00000250259	TF binding region
ENSG00000185619	Chromatin interaction

Extended variants
information (count: 79 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs3755956	1.00[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4647933	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4647946	1.00[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs60302202	1.00[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs62294525	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6814476	1.00[CEU][hapmap];0.89[CHB][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6855019	1.00[CEU][hapmap];0.89[CHB][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.87[TSI][hapmap];0.97[EUR][1000 genomes];0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:72 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv822425	chr4:540105-1413799	Weak transcription Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers ZNF genes & repeats Strong transcription Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	108 gene(s)	inside rSNPs	diseases
2	nsv530490	chr4:614355-1399150	Bivalent Enhancer Enhancers Flanking Active TSS Weak transcription Genic enhancers ZNF genes & repeats Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	104 gene(s)	inside rSNPs	diseases
3	esv1829397	chr4:655939-1041957	Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Weak transcription Flanking Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
4	nsv878255	chr4:708932-1052488	Weak transcription Flanking Active TSS Bivalent/Poised TSS Enhancers Active TSS Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	44 gene(s)	inside rSNPs	diseases
5	nsv878258	chr4:712222-1058358	Bivalent/Poised TSS Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Enhancers Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	44 gene(s)	inside rSNPs	diseases
6	nsv878260	chr4:713920-1052488	Bivalent Enhancer Weak transcription Genic enhancers Enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	44 gene(s)	inside rSNPs	diseases
7	nsv878261	chr4:756686-1047794	Active TSS Genic enhancers Enhancers Strong transcription Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
8	nsv1003219	chr4:769894-1105464	Strong transcription Weak transcription Flanking Bivalent TSS/Enh Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
9	nsv878263	chr4:771587-1047794	Weak transcription Enhancers Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	42 gene(s)	inside rSNPs	diseases
10	nsv432547	chr4:782301-1053930	Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
11	nsv878264	chr4:790757-1047794	Flanking Active TSS Enhancers ZNF genes & repeats Genic enhancers Active TSS Bivalent/Poised TSS Strong transcription Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
12	nsv878265	chr4:793929-1024752	Bivalent Enhancer Enhancers Weak transcription Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
13	nsv878266	chr4:793929-1058358	Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Strong transcription Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
14	nsv878269	chr4:795890-1024752	Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
15	nsv878270	chr4:798962-1024752	Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Weak transcription Active TSS Strong transcription Enhancers Flanking Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
16	nsv469998	chr4:809593-1087531	Strong transcription Active TSS Bivalent Enhancer Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
17	nsv878272	chr4:809787-1058358	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
18	nsv1008352	chr4:813393-1035416	Weak transcription Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
19	nsv878276	chr4:813393-1047794	Genic enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Active TSS Enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
20	nsv878277	chr4:813393-1087531	Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
21	nsv1012895	chr4:827866-1054874	Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
22	nsv536979	chr4:827866-1054874	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
23	nsv536980	chr4:827866-1167377	Active TSS Weak transcription Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Enhancers Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	40 gene(s)	inside rSNPs	diseases
24	nsv878280	chr4:828148-1052488	Weak transcription Strong transcription Genic enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
25	nsv878283	chr4:862156-1052488	Flanking Active TSS Enhancers Active TSS Weak transcription Strong transcription Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
26	nsv878285	chr4:891098-1052488	Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Enhancers Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
27	nsv1009619	chr4:901897-1215657	Strong transcription Weak transcription ZNF genes & repeats Flanking Active TSS Enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
28	nsv1003876	chr4:927509-1191316	Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription Active TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
29	nsv1000381	chr4:927509-1198766	Weak transcription Enhancers Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Active TSS Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
30	nsv870410	chr4:927839-1090974	Weak transcription Enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Genic enhancers Strong transcription Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
31	nsv878289	chr4:939883-1047794	Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
32	nsv878290	chr4:939883-1052488	Bivalent Enhancer Weak transcription Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
33	nsv878291	chr4:939883-1058358	Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Weak transcription Active TSS Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
34	nsv878292	chr4:939883-1087531	Enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Bivalent Enhancer Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
35	nsv878293	chr4:941518-1047794	Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
36	nsv878294	chr4:941518-1052488	Enhancers Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
37	nsv878295	chr4:941518-1064116	Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Enhancers Weak transcription Strong transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
38	esv1846290	chr4:941518-1081307	Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Flanking Active TSS Genic enhancers Weak transcription Enhancers Strong transcription Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
39	nsv878297	chr4:942006-1024752	Bivalent/Poised TSS Enhancers Flanking Active TSS Strong transcription Weak transcription Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
40	esv1799097	chr4:944191-1053162	Flanking Bivalent TSS/Enh Weak transcription Active TSS Enhancers Bivalent Enhancer Genic enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
41	nsv878300	chr4:946974-1024752	Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
42	nsv878302	chr4:946974-1045265	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
43	nsv878301	chr4:946974-1047794	Active TSS Strong transcription Bivalent Enhancer Bivalent/Poised TSS Enhancers Flanking Active TSS Genic enhancers Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
44	nsv878303	chr4:946974-1052488	Weak transcription Flanking Active TSS Genic enhancers Bivalent/Poised TSS Active TSS Strong transcription Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
45	nsv878304	chr4:946974-1058358	Enhancers Active TSS Bivalent/Poised TSS Flanking Active TSS Genic enhancers Weak transcription Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
46	esv1819351	chr4:949166-1037892	Weak transcription Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Enhancers Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
47	nsv878305	chr4:950737-1020129	Active TSS Flanking Bivalent TSS/Enh Genic enhancers Strong transcription Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	26 gene(s)	inside rSNPs	diseases
48	nsv878306	chr4:950737-1024287	Weak transcription Enhancers Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
49	nsv878308	chr4:951179-1038633	Bivalent Enhancer Active TSS Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
50	nsv878309	chr4:953974-1024287	Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription Enhancers Strong transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:112 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:1005000-1020200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
2	chr4:1006600-1027600	Weak transcription	Right Atrium	heart
3	chr4:1013400-1026600	Weak transcription	Brain Germinal Matrix	brain
4	chr4:1014200-1021600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
5	chr4:1014400-1021400	Weak transcription	Monocytes-CD14+_RO01746	blood
6	chr4:1014400-1023000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
7	chr4:1015400-1020800	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
8	chr4:1015400-1020800	Strong transcription	Fetal Stomach	stomach
9	chr4:1015600-1020200	Strong transcription	Cortex derived primary cultured neurospheres	brain
10	chr4:1015600-1020800	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr4:1015800-1020200	Strong transcription	Liver	Liver
12	chr4:1015800-1022200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
13	chr4:1016400-1020600	Weak transcription	Psoas Muscle	Psoas
14	chr4:1017000-1021200	Weak transcription	Stomach Mucosa	stomach
15	chr4:1017800-1021000	Genic enhancers	Fetal Muscle Leg	muscle
16	chr4:1018000-1020200	Strong transcription	Primary hematopoietic stem cells short term culture	blood
17	chr4:1018200-1020200	Strong transcription	HUES64 Cell Line	embryonic stem cell
18	chr4:1018200-1020200	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
19	chr4:1018200-1020200	Strong transcription	Brain Anterior Caudate	brain
20	chr4:1018200-1020200	Strong transcription	Stomach Smooth Muscle	stomach
21	chr4:1018200-1020200	Strong transcription	Thymus	Thymus
22	chr4:1018200-1020200	Strong transcription	NHLF	lung
23	chr4:1018400-1020200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
24	chr4:1018400-1020400	Strong transcription	Fetal Brain Female	brain
25	chr4:1018800-1020200	Transcr. at gene 5' and 3'	Foreskin Fibroblast Primary Cells skin02	Skin
26	chr4:1018800-1020400	Genic enhancers	Spleen	Spleen
27	chr4:1019000-1020200	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
28	chr4:1019000-1020200	ZNF genes & repeats	Fetal Brain Male	brain
29	chr4:1019000-1020200	Strong transcription	Rectal Smooth Muscle	rectum
30	chr4:1019200-1020200	Strong transcription	iPS-20b Cell Line	embryonic stem cell
31	chr4:1019200-1020200	Genic enhancers	Esophagus	oesophagus
32	chr4:1019200-1020200	Strong transcription	HepG2	liver
33	chr4:1019200-1021000	Genic enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
34	chr4:1019400-1020200	Strong transcription	Primary hematopoietic stem cells	blood
35	chr4:1019400-1020200	Strong transcription	NHDF-Ad	bronchial
36	chr4:1019400-1020200	Strong transcription	Osteobl	bone
37	chr4:1019400-1020400	Genic enhancers	Pancreas	Pancrea
38	chr4:1019600-1020200	ZNF genes & repeats	H9 Cell Line	embryonic stem cell
39	chr4:1019600-1020200	Genic enhancers	ES-UCSF4 Cell Line	embryonic stem cell
40	chr4:1019600-1020200	Genic enhancers	Breast Myoepithelial Primary Cells	Breast
41	chr4:1019600-1020200	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
42	chr4:1019600-1021800	Weak transcription	Colonic Mucosa	Colon
43	chr4:1019600-1027200	Weak transcription	Brain Inferior Temporal Lobe	brain
44	chr4:1019800-1020200	Genic enhancers	H1 Cell Line	embryonic stem cell
45	chr4:1019800-1020200	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
46	chr4:1019800-1020200	Genic enhancers	HUES6 Cell Line	embryonic stem cell
47	chr4:1019800-1020200	Genic enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
48	chr4:1019800-1020200	Genic enhancers	Adipose Nuclei	Adipose
49	chr4:1019800-1020200	Genic enhancers	Fetal Kidney	kidney
50	chr4:1019800-1020200	Transcr. at gene 5' and 3'	Gastric	stomach

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