Variant report

Variant rs62294525
Chromosome Location chr4:1009249-1009250
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:1005000-1020200 Weak transcription Primary T helper naive cells from peripheral blood blood
2 chr4:1005200-1013600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
3 chr4:1006000-1010600 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
4 chr4:1006000-1010600 Enhancers Spleen Spleen
5 chr4:1006400-1011400 Weak transcription Fetal Lung lung
6 chr4:1006400-1018000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr4:1006400-1018200 Weak transcription NHLF lung
8 chr4:1006400-1019000 Weak transcription HMEC breast
9 chr4:1006600-1009400 Weak transcription Skeletal Muscle Male skeletal muscle
10 chr4:1006600-1010000 Weak transcription Small Intestine intestine
11 chr4:1006600-1013200 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr4:1006600-1017600 Weak transcription Aorta Aorta
13 chr4:1006600-1027600 Weak transcription Right Atrium heart
14 chr4:1006800-1009800 Weak transcription Colonic Mucosa Colon
15 chr4:1006800-1010000 Genic enhancers Pancreas Pancrea
16 chr4:1006800-1011200 Weak transcription Right Ventricle heart
17 chr4:1006800-1012000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr4:1006800-1012800 Weak transcription iPS-15b Cell Line embryonic stem cell
19 chr4:1006800-1012800 Weak transcription Primary T helper cells PMA-I stimulated --
20 chr4:1006800-1014200 Weak transcription Primary T regulatory cells fromperipheralblood blood
21 chr4:1006800-1015200 Weak transcription Duodenum Mucosa Duodenum
22 chr4:1006800-1015200 Weak transcription Rectal Mucosa Donor 29 rectum
23 chr4:1006800-1015800 Weak transcription Sigmoid Colon Sigmoid Colon
24 chr4:1006800-1017600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
25 chr4:1006800-1018200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr4:1006800-1018200 Weak transcription Muscle Satellite Cultured Cells --
27 chr4:1006800-1018200 Weak transcription Esophagus oesophagus
28 chr4:1006800-1018200 Weak transcription Skeletal Muscle Female skeletal muscle
29 chr4:1006800-1018400 Weak transcription Duodenum Smooth Muscle Duodenum
30 chr4:1006800-1018800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr4:1006800-1019400 Weak transcription Osteobl bone
32 chr4:1007000-1010600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr4:1007000-1012800 Weak transcription Primary hematopoietic stem cells short term culture blood
34 chr4:1007000-1013200 Weak transcription A549 lung
35 chr4:1007000-1013800 Weak transcription Primary B cells from peripheral blood blood
36 chr4:1007000-1018400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr4:1007000-1019200 Weak transcription Fetal Heart heart
38 chr4:1007000-1019800 Weak transcription Hela-S3 cervix
39 chr4:1007200-1009600 Weak transcription Stomach Smooth Muscle stomach
40 chr4:1007200-1011600 Enhancers Brain Substantia Nigra brain
41 chr4:1007200-1012800 Weak transcription Primary T helper naive cells fromperipheralblood blood
42 chr4:1007200-1018200 Weak transcription K562 blood
43 chr4:1007400-1009800 Enhancers Fetal Adrenal Gland Adrenal Gland
44 chr4:1007400-1017400 Weak transcription Lung lung
45 chr4:1007600-1010400 Enhancers Brain Cingulate Gyrus brain
46 chr4:1007600-1010800 Enhancers Fetal Muscle Trunk muscle
47 chr4:1007600-1011600 Enhancers Brain Angular Gyrus brain
48 chr4:1007600-1011600 Weak transcription Gastric stomach
49 chr4:1007600-1012200 Weak transcription Stomach Mucosa stomach
50 chr4:1007600-1013000 Weak transcription Primary T cells fromperipheralblood blood

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