The 2.0 version of rSNPBase

Variant report

Variant rs3736830
Chromosome Location chr13:50306221-50306222
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:50266200-50307800 Weak transcription Gastric stomach
2 chr13:50266200-50316000 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr13:50266400-50349000 Weak transcription Esophagus oesophagus
4 chr13:50273200-50326000 Weak transcription Aorta Aorta
5 chr13:50273200-50333800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr13:50276000-50307600 Weak transcription Pancreas Pancrea
7 chr13:50277000-50318400 Weak transcription Hela-S3 cervix
8 chr13:50280000-50308000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr13:50290000-50306800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr13:50290000-50324000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
11 chr13:50290000-50334000 Weak transcription Primary T killer naive cells fromperipheralblood blood
12 chr13:50290200-50316800 Weak transcription ES-I3 Cell Line embryonic stem cell
13 chr13:50290400-50306800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr13:50290400-50307200 Strong transcription HUES64 Cell Line embryonic stem cell
15 chr13:50291000-50306800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
16 chr13:50291000-50306800 Strong transcription Primary monocytes fromperipheralblood blood
17 chr13:50293200-50326000 Weak transcription Fetal Brain Male brain
18 chr13:50294200-50315000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
19 chr13:50294200-50324000 Weak transcription Rectal Smooth Muscle rectum
20 chr13:50294400-50333000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
21 chr13:50294800-50314200 Weak transcription Stomach Mucosa stomach
22 chr13:50296200-50307600 Weak transcription Placenta Amnion Placenta Amnion
23 chr13:50296200-50330400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr13:50296400-50307200 Weak transcription Psoas Muscle Psoas
25 chr13:50296400-50307600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr13:50296400-50320200 Weak transcription Spleen Spleen
27 chr13:50296600-50307800 Weak transcription Brain Substantia Nigra brain
28 chr13:50296600-50307800 Weak transcription Lung lung
29 chr13:50296600-50309000 Weak transcription Brain Angular Gyrus brain
30 chr13:50296600-50330400 Weak transcription Small Intestine intestine
31 chr13:50296600-50338600 Weak transcription Ovary ovary
32 chr13:50296800-50315000 Weak transcription HMEC breast
33 chr13:50297000-50306400 Weak transcription HUVEC blood vessel
34 chr13:50297000-50322400 Weak transcription Brain Cingulate Gyrus brain
35 chr13:50297800-50307000 Strong transcription Monocytes-CD14+_RO01746 blood
36 chr13:50298000-50327600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr13:50298200-50307200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr13:50298800-50306800 Strong transcription Fetal Thymus thymus
39 chr13:50299000-50314400 Weak transcription Fetal Brain Female brain
40 chr13:50299200-50307800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
41 chr13:50299200-50327600 Weak transcription Primary T killer memory cells from peripheral blood blood
42 chr13:50299400-50307800 Weak transcription Primary T helper naive cells from peripheral blood blood
43 chr13:50299400-50319400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
44 chr13:50300600-50345600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
45 chr13:50300800-50307800 Weak transcription Fetal Kidney kidney
46 chr13:50300800-50321800 Weak transcription Brain Anterior Caudate brain
47 chr13:50301000-50319200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr13:50301200-50307400 Weak transcription Left Ventricle heart
49 chr13:50301200-50308400 Weak transcription H9 Cell Line embryonic stem cell
50 chr13:50301200-50316000 Weak transcription Primary B cells from peripheral blood blood

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Last update: Aug 31, 2015