Variant report

Variant	rs374382563
Chromosome Location	chr9:78921435-78921436
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 39 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:39 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869152	chr9:78742197-79583399	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
2	nsv931033	chr9:78850330-79366454	Genic enhancers Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Active TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
3	nsv508552	chr9:78864913-78956326	Active TSS Bivalent Enhancer Enhancers Flanking Active TSS Strong transcription Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
4	nsv893477	chr9:78892526-78932928	Weak transcription Strong transcription Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	n/a
5	esv1010025	chr9:78912186-78922397	Active TSS Enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
6	nsv614692	chr9:78917378-78921849	Weak transcription Enhancers Strong transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
7	esv3337929	chr9:78917532-78923930	Weak transcription Enhancers Strong transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
8	esv3424074	chr9:78918332-78923180	Weak transcription Enhancers Strong transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
9	esv3481660	chr9:78918557-78923505	Weak transcription Enhancers Strong transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
10	esv3430512	chr9:78918782-78923080	Enhancers Weak transcription Strong transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
11	esv3481659	chr9:78919070-78922425	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
12	esv3511711	chr9:78919076-78922664	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
13	nsv435888	chr9:78919188-78924556	Weak transcription Enhancers Strong transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
14	esv3396025	chr9:78919282-78922580	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
15	esv3366709	chr9:78919299-78922150	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
16	nsv512104	chr9:78919321-78922205	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
17	esv3481658	chr9:78919344-78922185	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
18	esv3335416	chr9:78919370-78922186	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
19	nsv614693	chr9:78919387-78921715	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
20	esv3494503	chr9:78919428-78922124	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
21	esv3494504	chr9:78919428-78922124	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
22	esv4993	chr9:78919432-78922174	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
23	esv3481661	chr9:78919447-78922096	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
24	esv995792	chr9:78919450-78921843	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
25	esv1007112	chr9:78919551-78922079	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
26	esv17460	chr9:78919551-78922079	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
27	nsv820404	chr9:78919551-78922079	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
28	esv1579961	chr9:78919621-78922015	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
29	esv1797705	chr9:78919851-78921467	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
30	esv1851386	chr9:78919851-78921467	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
31	esv1792100	chr9:78919851-78921715	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
32	esv1801306	chr9:78919851-78921715	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
33	esv1806474	chr9:78919851-78921715	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
34	esv1824728	chr9:78919851-78921715	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
35	nsv614694	chr9:78919851-78921849	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
36	nsv614695	chr9:78919851-78923257	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
37	nsv614696	chr9:78920114-78923257	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
38	esv3511712	chr9:78921352-78922146	Weak transcription	n/a	n/a	inside rSNPs	n/a
39	esv3511713	chr9:78921352-78922146	Weak transcription	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:78905800-78922400	Weak transcription	Sigmoid Colon	Sigmoid Colon
2	chr9:78912400-78927800	Weak transcription	Rectal Mucosa Donor 29	rectum
3	chr9:78913400-78935200	Weak transcription	Small Intestine	intestine
4	chr9:78916000-78925400	Weak transcription	Duodenum Mucosa	Duodenum
5	chr9:78917400-78928000	Weak transcription	Colonic Mucosa	Colon
6	chr9:78917600-78923600	Weak transcription	Fetal Intestine Large	intestine
7	chr9:78918000-78923000	Weak transcription	Stomach Mucosa	stomach
8	chr9:78918800-78924000	Weak transcription	Fetal Intestine Small	intestine
9	chr9:78919000-78924800	Weak transcription	Placenta	Placenta

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