The 2.0 version of rSNPBase

Variant report

Variant rs374699886
Chromosome Location chr11:10524310-10524311
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:108 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:10495000-10528000 Strong transcription Primary T helper naive cells fromperipheralblood blood
2 chr11:10495200-10530800 Strong transcription Primary T cells from cord blood blood
3 chr11:10495800-10529800 Strong transcription Primary T helper cells fromperipheralblood blood
4 chr11:10496600-10529000 Strong transcription Primary T helper cells PMA-I stimulated --
5 chr11:10501600-10550600 Weak transcription Small Intestine intestine
6 chr11:10502600-10529000 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr11:10502600-10560800 Weak transcription Fetal Brain Male brain
8 chr11:10507800-10544800 Weak transcription Fetal Kidney kidney
9 chr11:10510400-10524800 Weak transcription iPS-15b Cell Line embryonic stem cell
10 chr11:10510400-10528200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
11 chr11:10510600-10527800 Strong transcription Thymus Thymus
12 chr11:10510800-10528400 Strong transcription Primary T regulatory cells fromperipheralblood blood
13 chr11:10511000-10529600 Strong transcription Fetal Thymus thymus
14 chr11:10511000-10533200 Strong transcription Primary T cells fromperipheralblood blood
15 chr11:10512400-10526200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr11:10512400-10526800 Strong transcription NHEK skin
17 chr11:10512600-10525400 Weak transcription GM12878-XiMat blood
18 chr11:10512800-10526800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr11:10512800-10531600 Weak transcription Stomach Mucosa stomach
20 chr11:10512800-10540400 Weak transcription Fetal Lung lung
21 chr11:10512800-10548600 Weak transcription Right Ventricle heart
22 chr11:10513000-10525200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
23 chr11:10513000-10526800 Weak transcription HMEC breast
24 chr11:10513000-10531800 Weak transcription HUES64 Cell Line embryonic stem cell
25 chr11:10513200-10526000 Weak transcription Psoas Muscle Psoas
26 chr11:10513200-10527600 Weak transcription Right Atrium heart
27 chr11:10513200-10538000 Weak transcription Left Ventricle heart
28 chr11:10513400-10536000 Weak transcription A549 lung
29 chr11:10513800-10528200 Strong transcription Fetal Adrenal Gland Adrenal Gland
30 chr11:10514000-10527200 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
31 chr11:10514200-10525000 Strong transcription Muscle Satellite Cultured Cells --
32 chr11:10514200-10529600 Strong transcription Skeletal Muscle Female skeletal muscle
33 chr11:10514400-10524600 Strong transcription Brain Inferior Temporal Lobe brain
34 chr11:10514400-10525200 Strong transcription Breast Myoepithelial Primary Cells Breast
35 chr11:10514400-10526000 Strong transcription Brain Anterior Caudate brain
36 chr11:10514600-10524400 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
37 chr11:10514600-10524600 Strong transcription Sigmoid Colon Sigmoid Colon
38 chr11:10514600-10531400 Weak transcription HUES48 Cell Line embryonic stem cell
39 chr11:10514600-10535600 Weak transcription HSMM muscle
40 chr11:10514800-10524600 Strong transcription Lung lung
41 chr11:10514800-10528200 Strong transcription Skeletal Muscle Male skeletal muscle
42 chr11:10515000-10527000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr11:10515000-10528200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
44 chr11:10515800-10524600 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
45 chr11:10515800-10540600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr11:10516000-10544000 Weak transcription Primary T killer memory cells from peripheral blood blood
47 chr11:10516400-10524600 Strong transcription Fetal Intestine Small intestine
48 chr11:10517200-10531800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
49 chr11:10517400-10526000 Weak transcription Primary T killer naive cells fromperipheralblood blood
50 chr11:10517400-10526000 Weak transcription Ovary ovary

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Last update: Aug 31, 2015