Variant report

Variant rs3748175
Chromosome Location chr9:117180005-117180006
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:117160800-117197000 Weak transcription Gastric stomach
2 chr9:117161200-117199200 Weak transcription Right Atrium heart
3 chr9:117163800-117183000 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr9:117163800-117185800 Weak transcription Duodenum Mucosa Duodenum
5 chr9:117165600-117186200 Weak transcription Fetal Intestine Large intestine
6 chr9:117168200-117180200 Weak transcription Primary T regulatory cells fromperipheralblood blood
7 chr9:117169400-117180200 Weak transcription Fetal Intestine Small intestine
8 chr9:117170200-117180200 Weak transcription Brain Anterior Caudate brain
9 chr9:117170200-117180200 Weak transcription Pancreas Pancrea
10 chr9:117170200-117185600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr9:117171600-117181400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
12 chr9:117174000-117186400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr9:117175400-117196000 Weak transcription HepG2 liver
14 chr9:117176000-117183400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr9:117176600-117184000 Weak transcription Fetal Kidney kidney
16 chr9:117176600-117190400 Weak transcription Placenta Amnion Placenta Amnion
17 chr9:117177000-117180600 Weak transcription Fetal Lung lung
18 chr9:117177000-117181200 Weak transcription Brain Inferior Temporal Lobe brain
19 chr9:117177000-117184400 Weak transcription Colon Smooth Muscle Colon
20 chr9:117177000-117185800 Weak transcription ES-I3 Cell Line embryonic stem cell
21 chr9:117177000-117188400 Weak transcription Esophagus oesophagus
22 chr9:117177200-117180200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr9:117177200-117183400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
24 chr9:117177200-117189600 Weak transcription Rectal Smooth Muscle rectum
25 chr9:117177800-117180600 Enhancers Breast Myoepithelial Primary Cells Breast
26 chr9:117178000-117180600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
27 chr9:117178400-117180200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
28 chr9:117178600-117184400 Weak transcription Spleen Spleen
29 chr9:117178600-117189000 Strong transcription Stomach Smooth Muscle stomach
30 chr9:117178800-117182800 Weak transcription Monocytes-CD14+_RO01746 blood
31 chr9:117178800-117185800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
32 chr9:117179200-117180200 Genic enhancers Brain Hippocampus Middle brain
33 chr9:117179200-117180400 Enhancers Brain Cingulate Gyrus brain
34 chr9:117179400-117180400 Enhancers Osteobl bone
35 chr9:117179400-117180800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr9:117179400-117182000 Strong transcription Duodenum Smooth Muscle Duodenum
37 chr9:117179400-117183200 Strong transcription Fetal Adrenal Gland Adrenal Gland
38 chr9:117179600-117180200 Enhancers NHDF-Ad bronchial
39 chr9:117179600-117180400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr9:117179600-117180400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr9:117179600-117180400 Enhancers Muscle Satellite Cultured Cells --
42 chr9:117179600-117180400 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin01 Skin
43 chr9:117179600-117180400 Enhancers NH-A brain
44 chr9:117179600-117180600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
45 chr9:117179600-117181200 Strong transcription Thymus Thymus
46 chr9:117179600-117185000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
47 chr9:117179600-117188600 Strong transcription Fetal Stomach stomach
48 chr9:117179800-117180800 Enhancers Primary T cells from cord blood blood
49 chr9:117179800-117181000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
50 chr9:117179800-117181000 Enhancers Primary T helper cells fromperipheralblood blood

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