Variant report

Variant rs4979379
Chromosome Location chr9:117167192-117167193
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:117160800-117168000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
2 chr9:117160800-117168000 Weak transcription Placenta Amnion Placenta Amnion
3 chr9:117160800-117170800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
4 chr9:117160800-117171000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr9:117160800-117197000 Weak transcription Gastric stomach
6 chr9:117161000-117175200 Weak transcription Cortex derived primary cultured neurospheres brain
7 chr9:117161200-117167600 Weak transcription iPS-20b Cell Line embryonic stem cell
8 chr9:117161200-117167800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
9 chr9:117161200-117167800 Weak transcription Adipose Nuclei Adipose
10 chr9:117161200-117167800 Weak transcription Pancreatic Islets Pancreatic Islet
11 chr9:117161200-117168000 Weak transcription Fetal Muscle Leg muscle
12 chr9:117161200-117170000 Weak transcription Rectal Smooth Muscle rectum
13 chr9:117161200-117171200 Weak transcription H9 Cell Line embryonic stem cell
14 chr9:117161200-117171600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr9:117161200-117176200 Weak transcription Colon Smooth Muscle Colon
16 chr9:117161200-117199200 Weak transcription Right Atrium heart
17 chr9:117161400-117167800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
18 chr9:117163600-117167800 Weak transcription Colonic Mucosa Colon
19 chr9:117163800-117183000 Weak transcription Sigmoid Colon Sigmoid Colon
20 chr9:117163800-117185800 Weak transcription Duodenum Mucosa Duodenum
21 chr9:117164000-117167800 Weak transcription HUES6 Cell Line embryonic stem cell
22 chr9:117164000-117171000 Weak transcription iPS-15b Cell Line embryonic stem cell
23 chr9:117164200-117167800 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
24 chr9:117164400-117173400 Strong transcription Fetal Adrenal Gland Adrenal Gland
25 chr9:117164600-117167600 Weak transcription HepG2 liver
26 chr9:117165400-117171200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr9:117165600-117186200 Weak transcription Fetal Intestine Large intestine
28 chr9:117165800-117167600 Weak transcription Thymus Thymus
29 chr9:117166000-117168000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr9:117166000-117168000 Weak transcription Fetal Lung lung
31 chr9:117166000-117168200 Enhancers Breast Myoepithelial Primary Cells Breast
32 chr9:117166000-117168600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
33 chr9:117166000-117175600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr9:117166200-117167800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
35 chr9:117166200-117168000 Weak transcription Brain Inferior Temporal Lobe brain
36 chr9:117166200-117168000 Weak transcription Fetal Muscle Trunk muscle
37 chr9:117166200-117168200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr9:117166200-117168200 Weak transcription Pancreas Pancrea
39 chr9:117166200-117168400 Weak transcription Fetal Intestine Small intestine
40 chr9:117166400-117167800 Weak transcription Brain Anterior Caudate brain
41 chr9:117166400-117168000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
42 chr9:117166400-117168000 Weak transcription Brain Angular Gyrus brain
43 chr9:117166400-117168000 Weak transcription Brain Substantia Nigra brain
44 chr9:117166400-117168000 Weak transcription Stomach Smooth Muscle stomach
45 chr9:117166400-117168600 Weak transcription Esophagus oesophagus
46 chr9:117166400-117168800 Weak transcription Duodenum Smooth Muscle Duodenum
47 chr9:117166400-117174200 Weak transcription Ovary ovary
48 chr9:117166600-117167400 Enhancers GM12878-XiMat blood
49 chr9:117166600-117168000 Enhancers NHEK skin
50 chr9:117166600-117168400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived

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