Variant report

Variant rs3748687
Chromosome Location chr1:10736216-10736217
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:10698800-10752000 Weak transcription Primary T helper cells fromperipheralblood blood
2 chr1:10712600-10737000 Weak transcription iPS-15b Cell Line embryonic stem cell
3 chr1:10722800-10753000 Weak transcription Primary T cells from cord blood blood
4 chr1:10724200-10743200 Enhancers Fetal Heart heart
5 chr1:10725600-10736600 Weak transcription Primary T cells fromperipheralblood blood
6 chr1:10725600-10739200 Weak transcription Thymus Thymus
7 chr1:10726400-10741600 Weak transcription Brain Hippocampus Middle brain
8 chr1:10726400-10750000 Weak transcription Primary B cells from peripheral blood blood
9 chr1:10729000-10739400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
10 chr1:10729000-10739400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr1:10729200-10736400 Weak transcription ES-I3 Cell Line embryonic stem cell
12 chr1:10729200-10737400 Weak transcription Psoas Muscle Psoas
13 chr1:10730400-10752000 Genic enhancers Fetal Intestine Small intestine
14 chr1:10731000-10736800 Weak transcription H1 Cell Line embryonic stem cell
15 chr1:10731400-10736600 Weak transcription HUES48 Cell Line embryonic stem cell
16 chr1:10731400-10737000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
17 chr1:10731400-10744000 Enhancers Rectal Mucosa Donor 31 rectum
18 chr1:10731600-10743200 Weak transcription Small Intestine intestine
19 chr1:10731800-10748400 Weak transcription Primary B cells from cord blood blood
20 chr1:10732000-10736600 Weak transcription HUES6 Cell Line embryonic stem cell
21 chr1:10732000-10739400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr1:10732200-10739800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr1:10733400-10736400 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
24 chr1:10733400-10738400 Enhancers Left Ventricle heart
25 chr1:10733400-10742400 Enhancers Right Ventricle heart
26 chr1:10733600-10737200 Enhancers Colon Smooth Muscle Colon
27 chr1:10733600-10741600 Enhancers Skeletal Muscle Female skeletal muscle
28 chr1:10733800-10737400 Bivalent Enhancer Fetal Stomach stomach
29 chr1:10733800-10738400 Enhancers Pancreas Pancrea
30 chr1:10733800-10738400 Enhancers Rectal Mucosa Donor 29 rectum
31 chr1:10733800-10739600 Enhancers Duodenum Smooth Muscle Duodenum
32 chr1:10733800-10742400 Enhancers Skeletal Muscle Male skeletal muscle
33 chr1:10734000-10737000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr1:10734000-10737400 Weak transcription Fetal Kidney kidney
35 chr1:10734200-10736400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
36 chr1:10734200-10747800 Enhancers Fetal Intestine Large intestine
37 chr1:10734400-10737000 Enhancers Liver Liver
38 chr1:10734400-10737400 Enhancers Stomach Mucosa stomach
39 chr1:10734600-10739000 Enhancers Sigmoid Colon Sigmoid Colon
40 chr1:10734800-10737000 Enhancers Duodenum Mucosa Duodenum
41 chr1:10734800-10738600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr1:10735000-10740600 Weak transcription Aorta Aorta
43 chr1:10735000-10751600 Enhancers Lung lung
44 chr1:10735200-10738200 Enhancers Breast Myoepithelial Primary Cells Breast
45 chr1:10735200-10738200 Enhancers Fetal Adrenal Gland Adrenal Gland
46 chr1:10735200-10743400 Enhancers Placenta Placenta
47 chr1:10735400-10741600 Bivalent Enhancer Fetal Muscle Trunk muscle
48 chr1:10735600-10736600 Bivalent Enhancer Fetal Muscle Leg muscle
49 chr1:10735600-10736800 Weak transcription Fetal Lung lung
50 chr1:10735600-10737200 Enhancers Colonic Mucosa Colon

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