The 2.0 version of rSNPBase

Variant report

Variant rs376553
Chromosome Location chr11:9737831-9737832
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:106 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:9710200-9758400 Weak transcription Psoas Muscle Psoas
2 chr11:9711400-9754400 Weak transcription Placenta Amnion Placenta Amnion
3 chr11:9716000-9738000 Weak transcription HMEC breast
4 chr11:9717600-9738800 Weak transcription Fetal Muscle Trunk muscle
5 chr11:9717600-9739200 Weak transcription NHLF lung
6 chr11:9717600-9751000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
7 chr11:9717600-9751000 Weak transcription Ovary ovary
8 chr11:9718200-9749600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr11:9724000-9739400 Weak transcription Fetal Lung lung
10 chr11:9725200-9738200 Weak transcription Fetal Thymus thymus
11 chr11:9725200-9740800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
12 chr11:9725200-9749600 Weak transcription Primary T regulatory cells fromperipheralblood blood
13 chr11:9725400-9741800 Weak transcription Duodenum Smooth Muscle Duodenum
14 chr11:9725600-9748000 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr11:9726600-9749600 Weak transcription Liver Liver
16 chr11:9729600-9755400 Genic enhancers Primary B cells from peripheral blood blood
17 chr11:9730400-9739400 Weak transcription Colon Smooth Muscle Colon
18 chr11:9730600-9738000 Weak transcription NH-A brain
19 chr11:9730600-9738200 Weak transcription Sigmoid Colon Sigmoid Colon
20 chr11:9730600-9739400 Weak transcription Brain Inferior Temporal Lobe brain
21 chr11:9730600-9739400 Weak transcription Rectal Smooth Muscle rectum
22 chr11:9730600-9739400 Weak transcription Small Intestine intestine
23 chr11:9730600-9747200 Weak transcription Pancreas Pancrea
24 chr11:9730600-9758200 Weak transcription Esophagus oesophagus
25 chr11:9730800-9738000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr11:9730800-9738200 Weak transcription Lung lung
27 chr11:9730800-9738200 Weak transcription HSMMtube muscle
28 chr11:9731200-9740800 Weak transcription Brain Substantia Nigra brain
29 chr11:9732000-9754000 Weak transcription Duodenum Mucosa Duodenum
30 chr11:9733200-9738800 Weak transcription Skeletal Muscle Female skeletal muscle
31 chr11:9733200-9743800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr11:9733200-9754000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
33 chr11:9733400-9739000 Weak transcription Brain Cingulate Gyrus brain
34 chr11:9733400-9739400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
35 chr11:9733400-9749400 Weak transcription Stomach Smooth Muscle stomach
36 chr11:9733400-9754200 Weak transcription H9 Cell Line embryonic stem cell
37 chr11:9733600-9738000 Weak transcription Aorta Aorta
38 chr11:9733600-9738200 Weak transcription Right Atrium heart
39 chr11:9733600-9739400 Weak transcription Brain Hippocampus Middle brain
40 chr11:9733600-9739400 Weak transcription Fetal Kidney kidney
41 chr11:9733600-9741600 Weak transcription Primary T helper naive cells from peripheral blood blood
42 chr11:9733600-9757000 Weak transcription Fetal Brain Female brain
43 chr11:9733600-9761600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
44 chr11:9733800-9739600 Weak transcription Brain Angular Gyrus brain
45 chr11:9733800-9743800 Weak transcription iPS-15b Cell Line embryonic stem cell
46 chr11:9733800-9759800 Weak transcription Fetal Heart heart
47 chr11:9734600-9738200 Strong transcription HSMM muscle
48 chr11:9734800-9738200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
49 chr11:9735000-9738200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr11:9735000-9738400 Strong transcription iPS-20b Cell Line embryonic stem cell

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Last update: Aug 31, 2015