Variant report

Variant	rs377454062
Chromosome Location	chr3:159258319-159258320
allele	-/ATCT
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:10 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv998949	chr3:158774806-159394550	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	4 gene(s)	inside rSNPs	diseases
2	nsv877697	chr3:159198139-159259124	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv519199	chr3:159248823-159259124	Enhancers Bivalent Enhancer	n/a	n/a	inside rSNPs	diseases
4	esv3462777	chr3:159255058-159259656	Enhancers	lncRNA	n/a	inside rSNPs	diseases
5	esv3489704	chr3:159256308-159258706	Enhancers	n/a	n/a	inside rSNPs	diseases
6	esv3462778	chr3:159256694-159258374	Enhancers	n/a	n/a	inside rSNPs	diseases
7	nsv592127	chr3:159257120-159258371	Enhancers	n/a	n/a	inside rSNPs	diseases
8	esv1802128	chr3:159257120-159259458	Enhancers	lncRNA	n/a	inside rSNPs	diseases
9	esv1824952	chr3:159257120-159259458	Enhancers	lncRNA	n/a	inside rSNPs	diseases
10	esv3391615	chr3:159257671-159258360	Enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:159258200-159259400	Enhancers	Fetal Brain Male	brain

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links