Variant report

Variant	rs377605754
Chromosome Location	chr9:136858145-136858146
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr9:136857228-136858879	GM12891	blood:	n/a	n/a
2	CTCF	chr9:136858112-136858337	Lung_OC	lung:	n/a	n/a
3	CTCF	chr9:136858040-136858190	AG04450	lung:	n/a	n/a
4	CTCF	chr9:136858140-136858290	AG09309	skin:	n/a	n/a
5	CTCF	chr9:136858130-136858335	Kidney_OC	kidney:	n/a	n/a
6	MAZ	chr9:136857174-136858244	HepG2	liver:	n/a	chr9:136857600-136857610 chr9:136858076-136858086 chr9:136857597-136857612 chr9:136857599-136857608 chr9:136857602-136857609 chr9:136857601-136857610
7	CTCF	chr9:136858075-136858346	K562	blood:	n/a	n/a
8	GABPA	chr9:136857781-136858277	K562	blood:	n/a	chr9:136858030-136858039 chr9:136858091-136858105 chr9:136858076-136858085
9	RAD21	chr9:136858002-136858532	MCF-7	breast:	n/a	chr9:136858287-136858299 chr9:136858495-136858509 chr9:136858395-136858407
10	RFX5	chr9:136857940-136858795	Hela-S3	cervix:	n/a	n/a
11	YY1	chr9:136856487-136858833	HepG2	liver:	n/a	chr9:136857610-136857619 chr9:136858027-136858036 chr9:136857527-136857541 chr9:136857733-136857747 chr9:136856923-136856937 chr9:136858030-136858039 chr9:136858027-136858038 chr9:136857527-136857538 chr9:136858024-136858033 chr9:136857722-136857731 chr9:136857831-136857845 chr9:136857608-136857619
12	EP300	chr9:136858065-136858372	GM12878	blood:	n/a	n/a
13	HDAC2	chr9:136857979-136858316	HepG2	liver:	n/a	n/a
14	ELF1	chr9:136857954-136858482	MCF-7	breast:	n/a	chr9:136858040-136858053 chr9:136858073-136858085
15	SMARCB1	chr9:136855624-136859014	Hela-S3	cervix:	n/a	chr9:136856148-136856157
16	ZBTB7A	chr9:136857732-136858921	ECC-1	luminal epithelium:	n/a	chr9:136858646-136858655
17	ELF1	chr9:136857782-136858329	K562	blood:	n/a	chr9:136857883-136857895 chr9:136858040-136858053 chr9:136858073-136858085
18	POLR2A	chr9:136857062-136858894	GM12892	blood:	n/a	n/a
19	NR2F2	chr9:136856981-136858659	MCF-7	breast:	n/a	n/a
20	MAX	chr9:136858128-136858846	NB4	blood:	n/a	chr9:136858420-136858430
21	EGR1	chr9:136857904-136858199	K562	blood:	n/a	chr9:136858024-136858038 chr9:136858075-136858085 chr9:136858030-136858045 chr9:136858030-136858040 chr9:136858025-136858038 chr9:136858041-136858050 chr9:136858025-136858035 chr9:136857974-136857988 chr9:136858029-136858039 chr9:136858025-136858038 chr9:136858020-136858042 chr9:136858022-136858036 chr9:136858031-136858044 chr9:136858025-136858038 chr9:136858026-136858035 chr9:136858024-136858039
22	YY1	chr9:136858034-136858341	H1-hESC	embryonic stem cell:	n/a	n/a
23	MAX	chr9:136857088-136858880	HepG2	liver:	n/a	chr9:136857600-136857610 chr9:136858076-136858086 chr9:136858420-136858430 chr9:136857597-136857612 chr9:136857599-136857608 chr9:136857602-136857609 chr9:136857601-136857610
24	MAX	chr9:136857918-136858783	MCF-7	breast:	n/a	chr9:136858076-136858086 chr9:136858420-136858430
25	RAD21	chr9:136858069-136858878	Hela-S3	cervix:	n/a	chr9:136858287-136858299 chr9:136858495-136858509 chr9:136858395-136858407
26	CREB1	chr9:136857061-136858967	HepG2	liver:	n/a	n/a
27	GTF2F1	chr9:136858142-136858692	Hela-S3	cervix:	n/a	n/a
28	POLR2A	chr9:136857145-136858279	HCT-116	colon:	n/a	n/a
29	POLR2A	chr9:136857230-136858889	NB4	blood:	n/a	n/a
30	MYC	chr9:136857219-136858294	NB4	blood:	n/a	chr9:136857600-136857610 chr9:136858076-136858086 chr9:136857597-136857612 chr9:136857599-136857608 chr9:136857602-136857609 chr9:136857601-136857610
31	POLR2A	chr9:136856958-136858781	GM12892	blood:	n/a	n/a
32	POLR2A	chr9:136857232-136858707	HEK293	kidney:	n/a	n/a
33	ZBTB7A	chr9:136857838-136859076	ECC-1	luminal epithelium:	n/a	chr9:136858646-136858655
34	POLR2A	chr9:136857176-136858861	Gliobla	brain:	n/a	n/a
35	POLR2A	chr9:136856887-136858349	A549	lung:	n/a	n/a
36	BCL3	chr9:136857966-136858629	A549	lung:	n/a	chr9:136858041-136858050 chr9:136858023-136858032 chr9:136858029-136858038
37	MAX	chr9:136857829-136858856	MCF-7	breast:	n/a	chr9:136858076-136858086 chr9:136858420-136858430
38	CTCF	chr9:136858138-136858377	GM13977	blood:	n/a	n/a
39	CHD2	chr9:136857187-136858328	Hela-S3	cervix:	n/a	n/a
40	POLR2A	chr9:136857735-136858283	HepG2	liver:	n/a	n/a
41	NR2F2	chr9:136857937-136858264	K562	blood:	n/a	n/a
42	ZMIZ1	chr9:136858005-136858176	K562	blood:	n/a	n/a
43	MYC	chr9:136857140-136858186	MCF10A-Er-Src	breast:	n/a	chr9:136857600-136857610 chr9:136858076-136858086 chr9:136857597-136857612 chr9:136857599-136857608 chr9:136857602-136857609 chr9:136857601-136857610
44	CCNT2	chr9:136857387-136858522	K562	blood:	n/a	chr9:136858030-136858039 chr9:136858444-136858453
45	ELF1	chr9:136857040-136858276	GM12878	blood:	n/a	chr9:136857883-136857895 chr9:136857728-136857740 chr9:136858040-136858053 chr9:136858073-136858085 chr9:136857725-136857734
46	POLR2A	chr9:136857223-136858293	A549	lung:	n/a	n/a
47	POLR2A	chr9:136858016-136858763	GM12891	blood:	n/a	n/a
48	RAD21	chr9:136857975-136858375	HepG2	liver:	n/a	chr9:136858287-136858299
49	TCF7L2	chr9:136857191-136858313	HCT-116	colon:	n/a	n/a
50	CTCF	chr9:136858140-136858290	HPAF	blood vessel:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr9:136217971..136219533-chr9:136857799..136859450,2	MCF-7	breast:
2	chr9:136657461..136661655-chr9:136857893..136859866,4	K562	blood:
3	chr9:136835959..136838306-chr9:136857880..136859486,2	MCF-7	breast:
4	chr9:136855194..136860597-chr9:136929703..136933650,7	MCF-7	breast:
5	chr9:136647156..136647722-chr9:136857760..136858312,2	MCF-7	breast:
6	chr9:136600362..136604558-chr9:136857405..136860234,5	MCF-7	breast:
7	chr9:136857193..136859735-chr9:136888278..136891342,4	MCF-7	breast:
8	chr9:136625089..136627399-chr9:136858004..136860328,2	MCF-7	breast:
9	chr17:56084236..56085114-chr9:136858119..136858641,2	Hela-S3	cervix:
10	chr1:16678857..16679483-chr9:136857773..136858655,2	Hela-S3	cervix:
11	chr17:41465782..41466571-chr9:136857818..136858531,2	Hela-S3	cervix:
12	chr9:136657888..136659088-chr9:136857891..136858693,4	MCF-7	breast:
13	chr9:136856335..136860882-chr9:136888369..136892368,8	MCF-7	breast:
14	chr17:58677435..58680394-chr9:136857896..136860386,2	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-WDR5-7	chr9:136857728-136861324	NONHSAT135347

Variant related genes	Relation type
VAV2	TF binding region
ENSG00000055070	Chromatin interaction
ENSG00000170836	Chromatin interaction
ENSG00000037637	Chromatin interaction
ENSG00000123453	Chromatin interaction
ENSG00000188825	Chromatin interaction
ENSG00000235106	Chromatin interaction
ENSG00000136450	Chromatin interaction
ENSG00000169925	Chromatin interaction

Extended variants
information (count: 90 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:90 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv894124	chr9:136716399-136870787	Weak transcription Enhancers Active TSS Strong transcription Genic enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
2	nsv894125	chr9:136723520-136931957	Enhancers Strong transcription Weak transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
3	nsv894128	chr9:136753246-136906752	Enhancers Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Genic enhancers Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
4	nsv1046310	chr9:136762829-136872226	Enhancers Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer Active TSS Strong transcription Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
5	nsv894130	chr9:136767346-136906752	Enhancers ZNF genes & repeats Flanking Active TSS Weak transcription Strong transcription Genic enhancers Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
6	nsv831748	chr9:136788484-136944326	Genic enhancers Weak transcription Enhancers Strong transcription Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	30 gene(s)	inside rSNPs	diseases
7	nsv894131	chr9:136792765-136906752	Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
8	nsv831749	chr9:136809200-136915764	Transcr. at gene 5' and 3' Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
9	nsv894132	chr9:136813341-136950691	Active TSS Genic enhancers Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
10	nsv428226	chr9:136825035-136994606	Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Weak transcription Strong transcription Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
11	nsv615743	chr9:136835343-136874158	Enhancers Bivalent Enhancer Active TSS Weak transcription Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
12	nsv894133	chr9:136839840-136887757	Enhancers Active TSS Flanking Active TSS Genic enhancers Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
13	nsv894134	chr9:136839840-136892523	Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
14	nsv894135	chr9:136839840-136927657	Strong transcription Enhancers Genic enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
15	nsv894136	chr9:136839840-136938961	Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Strong transcription Weak transcription ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
16	nsv894137	chr9:136839840-136950691	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
17	nsv894138	chr9:136839840-137093168	Strong transcription Genic enhancers Enhancers Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
18	esv1819984	chr9:136842109-136858528	Active TSS Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
19	esv1822910	chr9:136842109-136858528	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
20	esv1824837	chr9:136842109-136858528	Flanking Active TSS Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
21	nsv615744	chr9:136843974-136865879	Enhancers Active TSS Genic enhancers Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
22	nsv615745	chr9:136844973-136876021	Enhancers Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
23	nsv825148	chr9:136848471-137025632	Flanking Bivalent TSS/Enh Active TSS Strong transcription Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
24	nsv615746	chr9:136848821-136881323	Enhancers Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
25	esv1799134	chr9:136850906-136863033	Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
26	esv1823529	chr9:136850906-136863033	Weak transcription Flanking Active TSS Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Active TSS Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
27	esv1834445	chr9:136850906-136863033	Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Weak transcription Strong transcription Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
28	esv1834811	chr9:136851763-136858419	Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Enhancers Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
29	nsv615747	chr9:136852501-136877628	Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
30	esv3429794	chr9:136856156-136858704	Flanking Active TSS Active TSS Enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
31	esv3412817	chr9:136856181-136858954	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
32	esv12802	chr9:136856554-136858557	Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
33	nsv615752	chr9:136856591-136858204	Active TSS Flanking Active TSS Weak transcription Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
34	nsv615753	chr9:136856591-136858317	Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
35	nsv615754	chr9:136856591-136858419	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription Enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
36	esv1792328	chr9:136856591-136858528	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Enhancers Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
37	esv1792434	chr9:136856591-136858528	Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Active TSS Weak transcription Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
38	esv1795551	chr9:136856591-136858528	Active TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
39	esv1801504	chr9:136856591-136858528	Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
40	esv1808578	chr9:136856591-136858528	Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Weak transcription Bivalent Enhancer Enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
41	esv1811379	chr9:136856591-136858528	Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer Bivalent/Poised TSS Enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
42	esv1818888	chr9:136856591-136858528	Flanking Active TSS Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription Enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
43	esv1829700	chr9:136856591-136858528	Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Bivalent Enhancer Weak transcription Enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
44	esv1835168	chr9:136856591-136858528	Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Weak transcription Enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
45	esv1835335	chr9:136856591-136858528	Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Active TSS Weak transcription Bivalent Enhancer Enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
46	esv1838773	chr9:136856591-136858528	Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
47	esv1842109	chr9:136856591-136858528	Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Weak transcription Enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
48	esv1844644	chr9:136856591-136858528	Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Weak transcription Enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
49	esv1845895	chr9:136856591-136858528	Active TSS Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
50	nsv615755	chr9:136856591-136858528	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Enhancers Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:136855000-136858800	Active TSS	Rectal Smooth Muscle	rectum
2	chr9:136855200-136858800	Active TSS	H9 Cell Line	embryonic stem cell
3	chr9:136855200-136858800	Active TSS	Pancreatic Islets	Pancreatic Islet
4	chr9:136855200-136859000	Active TSS	ES-I3 Cell Line	embryonic stem cell
5	chr9:136855400-136858200	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr9:136855400-136858400	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
7	chr9:136855400-136858400	Active TSS	GM12878-XiMat	blood
8	chr9:136855600-136858400	Active TSS	HSMMtube	muscle
9	chr9:136855600-136859000	Active TSS	iPS-15b Cell Line	embryonic stem cell
10	chr9:136855800-136858200	Active TSS	Duodenum Smooth Muscle	Duodenum
11	chr9:136855800-136858400	Active TSS	HSMM	muscle
12	chr9:136855800-136858600	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr9:136855800-136858800	Active TSS	HepG2	liver
14	chr9:136856000-136858200	Active TSS	Fetal Brain Female	brain
15	chr9:136856000-136858400	Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
16	chr9:136856000-136858400	Active TSS	Brain Anterior Caudate	brain
17	chr9:136856000-136858400	Active TSS	Fetal Intestine Small	intestine
18	chr9:136856000-136858400	Active TSS	Osteobl	bone
19	chr9:136856000-136858600	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
20	chr9:136856000-136858600	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
21	chr9:136856000-136858600	Active TSS	Small Intestine	intestine
22	chr9:136856000-136858800	Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
23	chr9:136856000-136858800	Active TSS	HUES48 Cell Line	embryonic stem cell
24	chr9:136856000-136858800	Active TSS	iPS-18 Cell Line	embryonic stem cell
25	chr9:136856000-136858800	Active TSS	Breast Myoepithelial Primary Cells	Breast
26	chr9:136856000-136858800	Active TSS	Fetal Kidney	kidney
27	chr9:136856000-136858800	Active TSS	Placenta Amnion	Placenta Amnion
28	chr9:136856200-136858200	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
29	chr9:136856200-136858400	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
30	chr9:136856200-136858400	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
31	chr9:136856200-136858400	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
32	chr9:136856200-136858400	Active TSS	Fetal Intestine Large	intestine
33	chr9:136856200-136858400	Active TSS	Psoas Muscle	Psoas
34	chr9:136856200-136858400	Active TSS	Hela-S3	cervix
35	chr9:136856200-136858600	Active TSS	HUES6 Cell Line	embryonic stem cell
36	chr9:136856200-136858600	Active TSS	Aorta	Aorta
37	chr9:136856200-136858600	Active TSS	A549	lung
38	chr9:136856200-136858800	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
39	chr9:136856200-136858800	Active TSS	Brain Substantia Nigra	brain
40	chr9:136856200-136858800	Active TSS	Left Ventricle	heart
41	chr9:136856200-136858800	Active TSS	Right Atrium	heart
42	chr9:136856200-136858800	Active TSS	NHDF-Ad	bronchial
43	chr9:136856200-136859000	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
44	chr9:136856200-136859000	Active TSS	Brain Angular Gyrus	brain
45	chr9:136856400-136858200	Active TSS	Duodenum Mucosa	Duodenum
46	chr9:136856400-136858200	Active TSS	HMEC	breast
47	chr9:136856400-136858200	Active TSS	HUVEC	blood vessel
48	chr9:136856400-136858400	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
49	chr9:136856400-136858400	Active TSS	Primary B cells from peripheral blood	blood
50	chr9:136856400-136858400	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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