The 2.0 version of rSNPBase

Variant report

Variant rs3808951
Chromosome Location chr10:116336887-116336888
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:116318000-116337200 Weak transcription Fetal Muscle Trunk muscle
2 chr10:116323400-116352000 Weak transcription Primary hematopoietic stem cells blood
3 chr10:116323800-116352000 Weak transcription Fetal Intestine Large intestine
4 chr10:116324200-116337400 Weak transcription Fetal Stomach stomach
5 chr10:116331000-116339000 Weak transcription Primary T regulatory cells fromperipheralblood blood
6 chr10:116332200-116337000 Weak transcription A549 lung
7 chr10:116333600-116345000 Weak transcription ES-I3 Cell Line embryonic stem cell
8 chr10:116334600-116337200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
9 chr10:116335200-116337000 Enhancers Brain Angular Gyrus brain
10 chr10:116335200-116337000 Enhancers Fetal Heart heart
11 chr10:116335200-116337200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr10:116335200-116337600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr10:116335200-116337600 Enhancers HMEC breast
14 chr10:116335200-116337800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr10:116335200-116337800 Enhancers Adipose Nuclei Adipose
16 chr10:116335200-116338000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
17 chr10:116335200-116338000 Enhancers HSMM muscle
18 chr10:116335200-116338200 Enhancers Right Atrium heart
19 chr10:116335400-116337000 Enhancers Aorta Aorta
20 chr10:116335400-116337200 Enhancers NHEK skin
21 chr10:116335400-116337400 Weak transcription Primary hematopoietic stem cells short term culture blood
22 chr10:116335400-116337400 Weak transcription Pancreatic Islets Pancreatic Islet
23 chr10:116335400-116337800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr10:116335400-116337800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr10:116335400-116337800 Enhancers Liver Liver
26 chr10:116335400-116337800 Enhancers Brain Hippocampus Middle brain
27 chr10:116335400-116338000 Enhancers Skeletal Muscle Male skeletal muscle
28 chr10:116335400-116351600 Weak transcription Fetal Intestine Small intestine
29 chr10:116335600-116343400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr10:116335600-116344200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr10:116335800-116338000 Enhancers Skeletal Muscle Female skeletal muscle
32 chr10:116336000-116337000 Enhancers Brain Anterior Caudate brain
33 chr10:116336000-116337200 Enhancers Fetal Adrenal Gland Adrenal Gland
34 chr10:116336000-116337400 Enhancers NH-A brain
35 chr10:116336200-116337000 Enhancers Esophagus oesophagus
36 chr10:116336200-116338000 Enhancers Muscle Satellite Cultured Cells --
37 chr10:116336200-116338000 Enhancers HSMMtube muscle
38 chr10:116336400-116337400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr10:116336400-116337600 Enhancers Hela-S3 cervix
40 chr10:116336400-116339600 Enhancers Breast Myoepithelial Primary Cells Breast
41 chr10:116336600-116337000 Enhancers Osteobl bone
42 chr10:116336600-116337200 Enhancers Fetal Lung lung
43 chr10:116336600-116337400 Enhancers NHLF lung
44 chr10:116336600-116337600 Enhancers NHDF-Ad bronchial
45 chr10:116336600-116337800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
46 chr10:116336600-116337800 Enhancers HUVEC blood vessel
47 chr10:116336600-116338200 Enhancers Brain Substantia Nigra brain
48 chr10:116336600-116341200 Weak transcription Brain Cingulate Gyrus brain
49 chr10:116336800-116337400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr10:116336800-116337600 Weak transcription Right Ventricle heart

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Last update: Aug 31, 2015